| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4085 |
|---|
| Symbol | |
|---|
| ID | 5802564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 4352050 |
|---|
| End bp | 4352892 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641341864 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001608370 |
|---|
| Protein GI | 162421429 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.515626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGTT ATCGCCATAG TTTTCATGCT GGCAATCATG CCGACGTCCT TAAACATACC
GTTCAGAGCC TGATTATTGA GGCAATGAAA GAGAAAGAAA AACCTTTCCT TTATCTGGAT
ACTCACGCGG GTGCAGGGCG CTACCAACTG AGTGGCGAGC ATGCCGAGCG TACCGGGGAA
TACCTCGACG GTATCGGCAA GCTGTGGCAG CGCGATGACT TACCCGCAGA TTTAGCCCCG
TATATGAGCG CAATCAACTA TTTTAACCGT GGCGAAAAAC TGCGCTACTA CCCTGGCTCG
CCGTTAATCG CACGTCATTT ATTACGTGAA GACGACAAAA TCCATCTGAC CGAATTGCAT
TCCAGCGATT ACCCACTGTT GCGCAATGAG TTTGCCAAAG ACGAACGTGC AAAAGTACAG
CGTGCCGATG GTTATCAGCA GCTTAAATCA CAATTACCGC CGCTATCGCG CCGTGGCTTT
GTGCTGATCG ACCCACCGTA TGAAATGAAA ACTGATTATC AGGATGTGGT GAAAGGTATT
CAGGAGGGCT ATAAACGATT CGCAACGGGT ACCTATGCGC TCTGGTATCC GGTCGTTCTG
CGCCAGCAAA TTAAACGTCT GTTACGGGAT CTGGAAGCCA CGGGTATCCG CCGTATCCTG
CAAATTGAAC TGGCGGTACG CCCAGATAGC GACCAGCACG GTATGACCGC ATCCGGCATG
ATTGTGATTA ATCCGCCGTG GAAATTAGAA CAGCAAATGA ATTCATTATT GCCGTGGCTG
CACAACGTGT TGGTCCCATC AGGCCACGGT CATACGCTGG TAAAATGGGT AGTACCTGAA
TGA
|
|---|
| Protein sequence | MLSYRHSFHA GNHADVLKHT VQSLIIEAMK EKEKPFLYLD THAGAGRYQL SGEHAERTGE
YLDGIGKLWQ RDDLPADLAP YMSAINYFNR GEKLRYYPGS PLIARHLLRE DDKIHLTELH
SSDYPLLRNE FAKDERAKVQ RADGYQQLKS QLPPLSRRGF VLIDPPYEMK TDYQDVVKGI
QEGYKRFATG TYALWYPVVL RQQIKRLLRD LEATGIRRIL QIELAVRPDS DQHGMTASGM
IVINPPWKLE QQMNSLLPWL HNVLVPSGHG HTLVKWVVPE
|
|---|
| |