Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4060 |
Symbol | dppF |
ID | 5802539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4321269 |
End bp | 4322345 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341842 |
Product | dipeptide transporter ATP-binding subunit |
Protein accession | YP_001608348 |
Protein GI | 162418541 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGA ACACTGAAGC GGCGCATAAA GTAAACATGA TGGGTGAAAC CGAAATAAAG GGAGAAAGTT TGCCAGCAGA GACGGGTAAA AAGCCGTTAT TACAGGCGAT CGATCTGAAA AAATACTACC CGGTGAAAAA GGGTTTCTTT ACACCAGAAC GTTTGGTTAA AGCACTGGAT GGCGTTTCAT TCACATTGGA GCGGGGCAAA ACATTGGCGG TAGTGGGTGA ATCAGGTTGT GGTAAATCCA CTCTGGGCCG TTTACTGACG ATGATAGAGA TCCCTACCGG CGGCGAACTA TACTATCAAG GGCAGGATCT GCTCAAGCCC GATGAAAGTG CGGAAAAACT GCGACGCCAG AAGATTCAGA TTGTCTTCCA GAACCCCTAC GGTTCGCTGA ATCCACGTAA GAAGGTGGGG CAGATTTTGG AAGAGCCATT GCAGATCAAT ACCCAGCTCA ATCGCAAGGA GCGCCGCGAA AAAACCTTGG CAATGATGGC GAAAGTGGGC CTGAAAACTG AACATTATGA TCGCTATCCT CATATGTTTT CCGGTGGTCA GCGTCAACGG ATCGCCATTG CCCGTGGATT GATGTTAAAC CCTGATGTGG TGATTGCCGA TGAGCCGGTA TCTGCGCTGG ATGTCTCCGT GCGGGCGCAG GTACTGAACC TGATGATGGA TTTACAGCAG GAATTGGGGC TGTCATATGT GTTTATTTCC CATGACCTGT CGGTGGTTGA ACATATTGCT GACGACGTGA TGGTGATGTA TTTGGGGCGC TGCGTTGAAA AAGGCAGCAA AGAGGCTATT TTTAACAACC CCCGCCATCC TTATACGCAA GCATTGCTAT CAGCGACACC GCGTCTGAAC CCAGATATGC GTCGTGAGCG TATTAAATTG ACTGGAGAAC TACCCAGCCC AATGAATCCA CCGCCAGGTT GTGCATTCAA TGCCCGCTGT CGTAGAGCAT TTGGCACCTG TAGCCAGTTA CAACCGCAGC TTAAGCAGTA TGGTGACCAG ATGGTGGCGT GTTTTGCCGT TGATCAGGAT GAAGCAGAGA AGGTCGTTTC TGTTTGA
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Protein sequence | MNSNTEAAHK VNMMGETEIK GESLPAETGK KPLLQAIDLK KYYPVKKGFF TPERLVKALD GVSFTLERGK TLAVVGESGC GKSTLGRLLT MIEIPTGGEL YYQGQDLLKP DESAEKLRRQ KIQIVFQNPY GSLNPRKKVG QILEEPLQIN TQLNRKERRE KTLAMMAKVG LKTEHYDRYP HMFSGGQRQR IAIARGLMLN PDVVIADEPV SALDVSVRAQ VLNLMMDLQQ ELGLSYVFIS HDLSVVEHIA DDVMVMYLGR CVEKGSKEAI FNNPRHPYTQ ALLSATPRLN PDMRRERIKL TGELPSPMNP PPGCAFNARC RRAFGTCSQL QPQLKQYGDQ MVACFAVDQD EAEKVVSV
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