| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4056 |
|---|
| Symbol | dppA |
|---|
| ID | 5802535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4316457 |
|---|
| End bp | 4318064 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641341839 |
|---|
| Product | periplasmic dipeptide transport protein |
|---|
| Protein accession | YP_001608345 |
|---|
| Protein GI | 162420607 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTT CCTTGAGAAG AACAGGGATA CTGAAATTCG GTATTGGGCT GGTTGCACTG
ACTATAGCGG CCAGTGTACA GGCAAAAACG CTAGTATATT GTTCTGAGGG GTCACCGGAA
GGTTTCAACC CACAACTCTT TACTTCTGGC ACAACTTATG ACGCAAGCTC GGTACCTATT
TACAATCGTT TAGTGGAGTT CAAAATCGGG ACTACCGAAA TTGAACCCAG CCTGGCGGAG
CGGTGGGAAG TGAGCGAAGA TGGTAAAACC TACACTTTCT ACCTGCGTAA GGGTGTGAAA
TGGCAGGATA ATAAAGATTT CAAACCCACC CGCGATTTCA ATGCTGATGA TGTTATCTAT
TCATTCATGC GTCAGAAAGA TGATAAAAAC CCGTACCATA AAGTCTCTGG TGGCAGCTAT
GAATACTTCC AGGGTATGGG AATGGGCGAC TTAATCACCA ATGTGGTGAA AGTTGACGAC
AATACCGTTC GCTTTGAACT GACCCGTCCG GAATCGCCAT TCTTGGCAGA CCTGGCGATG
GATTTCGCCT CTATCCTGTC CGCTGAATAC GCCGACAATA TGCTGAAAGC AGGCACCCCG
GAAAAAGTGG ATTTGAACCC AATCGGTACC GGCCCATTCC AACTGCAACA GTACCAAAAA
GACTCCCGTA TTCTGTATAA AGCGTTTCCT GGTTTCTGGG GCACCAAACC AAAAATTGAT
CGCCTGGTCT TCTCTATCAC CCCAGATGCC TCCGTTCGCT ATGCTAAATT GCAGAAAAAC
GAATGTCAGA TTATGCCTTA CCCGAACCCG GCTGACATCG CCCGGATGAA AGAAGACAAA
ACGATTAACC TGATGGAACA ACCGGGTCTG AACGTCGGTT ACCTCTCCTT CAACATTGAG
AAGAAACCAC TCGATAACCT TAAGGTCCGT CAGGCACTGA CCATGGCGGT TAACAAAGAC
GCGATTATTG ATGCGGTTTA TCAAGGCGCG GGGCAAGCGG CCAAAAACCT GATCCCACCA
ACGATGTGGG GCTACAACGA TGATGTGAAA GATTACGCTT ACGATCCCGC TAAAGCGAAA
GAACTGCTGA AAGAAGCGGG TCTGCCAGAT GGCTTCTCCA TCGACCTGTG GGCCATGCCG
GTTCAACGTC CGTATAACCC AAATGCGCGT CGTATGGCGG AAATGATCCA GTCTGATTGG
GCGAAAATTG GTGTGAAAGC CAAGATCGTG ACCTATGAGT GGGGCGAATA CCTCAAGCGT
GCCAAAGATG GCGAACATGA AACTGTGATG ATGGGTTGGA CCGGGGACAA TGGGGACCCA
GACAACTTCT TCGCTACGCT GTTCAGTTGT GATGCGGCCA AGCAGGGTTC TAACTACTCT
AAATGGTGTT ATAAGCCGTT TGAAGATTTG ATCCAACCAG CCCGTGCTGA AGCTGACCAT
GACAAACGTG TCGCACTTTA CAAACAAGCT CAGGTTGTGA TGAACGAGCA GGCCCCGGCG
CTGATCATTG CTCACTCAAC GGTGTACGAG CCAGTGCGTA AAGAAGTGAA AGGCTATGTT
GTGGACCCAT TGGGTAAACA TCATTTCGAT AACGTGTCCC TGGATTAA
|
|---|
| Protein sequence | MTISLRRTGI LKFGIGLVAL TIAASVQAKT LVYCSEGSPE GFNPQLFTSG TTYDASSVPI
YNRLVEFKIG TTEIEPSLAE RWEVSEDGKT YTFYLRKGVK WQDNKDFKPT RDFNADDVIY
SFMRQKDDKN PYHKVSGGSY EYFQGMGMGD LITNVVKVDD NTVRFELTRP ESPFLADLAM
DFASILSAEY ADNMLKAGTP EKVDLNPIGT GPFQLQQYQK DSRILYKAFP GFWGTKPKID
RLVFSITPDA SVRYAKLQKN ECQIMPYPNP ADIARMKEDK TINLMEQPGL NVGYLSFNIE
KKPLDNLKVR QALTMAVNKD AIIDAVYQGA GQAAKNLIPP TMWGYNDDVK DYAYDPAKAK
ELLKEAGLPD GFSIDLWAMP VQRPYNPNAR RMAEMIQSDW AKIGVKAKIV TYEWGEYLKR
AKDGEHETVM MGWTGDNGDP DNFFATLFSC DAAKQGSNYS KWCYKPFEDL IQPARAEADH
DKRVALYKQA QVVMNEQAPA LIIAHSTVYE PVRKEVKGYV VDPLGKHHFD NVSLD
|
|---|
| |