Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4006 |
Symbol | |
ID | 5802485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4260089 |
End bp | 4261249 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641341792 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001608299 |
Protein GI | 162421607 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGTA AAATTATTTT GGCCTGTTTG GTGTTCACGC TTGTCGCTTG TGATCAATCC TCTTCACCTT CAGCGACACC CTCGCGACAA GAGGTGGGGG TGGTGACCTT AAAAACTCAA CCGGTCACAT TGAGTAGCGA TTTATCAGGC CGAACGGTGG CGGCAATGAC GTCTGAAGTC AGGCCACAGG TCGATGGTAT CATCAAGAAA CGCTTGTTTA CTGAAGGATC TGAAGTCACC GCGGGACAAG TGCTCTATCA AATAGACCCT GCTAGTTATC AGGCCGCTTA TGACACCGCA AAAGCCGCGC TACAAAATGT TCAGGTCAGC GTAAAATCGG CCAAGCTGAA AGCCCAGCGC TATGCGGCAT TAGCCAAAGA AAATGGTGTG TCGCAGCAAG ATGCTGATGA CGCCCAAACC AGCTATCAGC AAGCGCTGGC CAATGTGGCC GAAAAAACTG CTGCGCTGGA AACGGCGCGT ATCAATTTGG CCTATACCCA AGTGCGGGCA CCCATTTCAG GTCGCATCGG CATTTCCTCT GTGACACCAG GGGCGCTGGT GACGGCTAAT CAAACCACGG CATTAGCCAC CATCCGTAAC CTTGATCCCA TTTATGTTGA TTTAACCCAG TCCAGTGCGC AGTTGCTTGC TTTACGCAAA CAGCAGCAGG CAGGCAATGA CACAGTAGCG AATGCGCCGG TTCAGCTAAC GCTGGAAGAT GGCTCGGTTT ATGCCCACGA AGGTTCTCTG CAACTGACCG AGGTGGCCGT GGATGAAGCG ACCGGTGCGG TGACCTTGCG TGCGAAATTC CCTAACCCTG AACACCAATT ATTGCCGGGC ATGTTTGTTC GCGCTTCAGT ACGGAACGGT GTAAATAACA CCGCTATTTT GGCACCACAG CAAGGCATCA CTCATGATGC GAAAGGGAAT GCTACCGCGT TGGTGGTTAA TCAACAGCAG CAAGTTGAGC GGCGTGAAGT GGTAACCGAA CGCACGATTG ATAGCTACTG GTTGATTAGC CGTGGGCTGG CTGCAGGTGA CCGCCTGATT GTTGAAGGAA CCGAAAAGGT CAGTGTTGGC GATGACGTCA AACCGGTAGA GGTGAGCACT ACGCTGCCCG TTGTGGCCGA ACCGACTACG CCATCAACTG GGGAGAAATA A
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Protein sequence | MHSKIILACL VFTLVACDQS SSPSATPSRQ EVGVVTLKTQ PVTLSSDLSG RTVAAMTSEV RPQVDGIIKK RLFTEGSEVT AGQVLYQIDP ASYQAAYDTA KAALQNVQVS VKSAKLKAQR YAALAKENGV SQQDADDAQT SYQQALANVA EKTAALETAR INLAYTQVRA PISGRIGISS VTPGALVTAN QTTALATIRN LDPIYVDLTQ SSAQLLALRK QQQAGNDTVA NAPVQLTLED GSVYAHEGSL QLTEVAVDEA TGAVTLRAKF PNPEHQLLPG MFVRASVRNG VNNTAILAPQ QGITHDAKGN ATALVVNQQQ QVERREVVTE RTIDSYWLIS RGLAAGDRLI VEGTEKVSVG DDVKPVEVST TLPVVAEPTT PSTGEK
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