Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3999 |
Symbol | pnp |
ID | 5802478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4252025 |
End bp | 4254142 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341785 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001608292 |
Protein GI | 162418341 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGACTC CGATTATTCG TAAATTCCAG TATGGTCAAC ATACCGTAAC TATCGAAACT GGTATGATGG CTCGCCAGGC CACTGCAGCC GTAATGGTAA GCATGGACGA CACTGCAGTA TTCGTGACTG TTGTTGGTCA AAAGAAAGCC AAACCAGGCC AGAGTTTCTT CCCTCTGACG GTTAACTATC AGGAGCGTAC TTACGCTGCT GGCCGTATCC CAGGTAGCTT CTTCCGTCGT GAAGGCCGCC CAAGTGAAGG CGAAACACTG ACTTCACGTC TGATCGACCG CCCAATTCGC CCACTGTTCC CAGACAGCTT CCTGAACGAA GTTCAAGTGA TTGCAACCGT CGTTTCGGTT AACCCACAAA TTAACCCAGA CATCGTGGCA CTGATTGGTG CATCTGCGGC ACTGAGCTTG TCAGGCATTC CATTTAACGG CCCAATCGGT GCTGCTCGCG TTGGTTTTAT CAACGACCAG TATGTGCTGA ACCCAACCAC TGACGAGCTG AAAGAGAGCC GTTTGGATCT GGTTGTTGCC GGTACTGCGG GTGCAGTGCT GATGGTTGAA TCAGAAGCCG ATATTCTGTC CGAAGAGCAA ATGTTGGGCG CGGTCGTCTT CGGCCACGAA CAACAGCAAG TTGTGATTGA AAATATTAAC GCTTTGGTTG CTGAAGCTGG CAAACCTAAG TGGGATTGGC AGGCAGAGCC TGTCAACGAA GCACTGCATG CGCGTGTTGC TGAACTGGCC GAAGCGCGTC TGGGCGATGC ATACCGTATC ACTGAAAAAC AAGAACGTTA TACGCAAGTT GATGCTATCA AAGCTGACGT GACCGAAGCG CTATTAGCGC AGGACGACAC ATTAGATGCC GCTGAAATTC AGGATATCCT GGCCAGCGTT GAGAAAAATG TTGTGCGTAG CCGTGTGCTG CGTGGTGAGC CACGTATCGA TGGTCGCGAA AAAGACATGA TCCGTGGTTT GGATGTACGT ACTGGCATCT TGCCACGTAC TCATGGTTCT GCCTTGTTCA CCCGCGGTGA AACTCAGGCG TTGGTTACCG CTACGCTGGG TACGGCACGT GACGCACAAA ACATTGATGA GTTGATGGGT GAGCGCACAG ATTCATTCCT GTTACACTAT AATTTCCCTC CGTATTGTGT AGGCGAAACA GGGATGGTTG GCTCACCTAA GCGTCGTGAG ATTGGCCATG GCCGCCTTGC GAAACGTGGT GTTCTGGCTG TGATGCCAAG TGCGAGCGAG TTCCCTTACA CTATTCGTGT GGTTTCTGAA ATCACCGAGT CTAATGGTTC TTCCTCAATG GCTTCTGTTT GTGGTGCTTC TCTGGCTCTG ATGGATGCGG GCGTGCCAAT TAAAGCCGCT GTTGCTGGTA TTGCAATGGG CCTGGTAAAA GAGGGTGATA ACTTTGTCGT TCTGTCTGAC ATTCTGGGTG ACGAAGATCA CTTGGGCGAC ATGGACTTTA AAGTAGCCGG TAGCCGTGAC GGTGTGACCG CACTGCAAAT GGACATTAAA ATTGAAGGTA TTACCCGCGA AATTATGCAG GTAGCTCTGA ATCAGGCTAA GGGTGCACGT TTGCACATTC TGGGCGTGAT GGAACAGGCT ATCAGCACAC CACGTGGCGA TATCTCTGAG TTTGCTCCAC GTATCTACAC CATGAAGATC AACCCTGAGA AAATCAAGGA TGTGATCGGT AAAGGTGGTT CGGTGATCCG TGCGCTGACT GATGAAACTG GCACCACGAT TGAAATCGAA GATGATGGTA CCATTAAGAT TGCAGCAACT GATGGCGATA AAGCAAAACA CGCTATCCGT CGTATCGAAG AGATTACTGC TGAAATCGAA GTGGGCCGTA TTTACGCAGG TAAAGTCACC CGTATCGTTG ATTTCGGTGC ATTTGTTGCT ATCGGTGGCG GTAAAGAAGG TCTGGTACAT ATTTCTCAAA TCGCTGATAA GCGTGTAGAG AAAGTGACAG ACTACCTGCA GATGGGTCAA GATGTGCCAG TTAAAGTAAT GGAAGTTGAT CGTCAGGGCC GTATCCGCCT GAGCATCAAA GAAGCCACTA CTCCTGACGC AGAAGCACCA GAAGCAGCAG CAGAGTAA
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Protein sequence | MLTPIIRKFQ YGQHTVTIET GMMARQATAA VMVSMDDTAV FVTVVGQKKA KPGQSFFPLT VNYQERTYAA GRIPGSFFRR EGRPSEGETL TSRLIDRPIR PLFPDSFLNE VQVIATVVSV NPQINPDIVA LIGASAALSL SGIPFNGPIG AARVGFINDQ YVLNPTTDEL KESRLDLVVA GTAGAVLMVE SEADILSEEQ MLGAVVFGHE QQQVVIENIN ALVAEAGKPK WDWQAEPVNE ALHARVAELA EARLGDAYRI TEKQERYTQV DAIKADVTEA LLAQDDTLDA AEIQDILASV EKNVVRSRVL RGEPRIDGRE KDMIRGLDVR TGILPRTHGS ALFTRGETQA LVTATLGTAR DAQNIDELMG ERTDSFLLHY NFPPYCVGET GMVGSPKRRE IGHGRLAKRG VLAVMPSASE FPYTIRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKAA VAGIAMGLVK EGDNFVVLSD ILGDEDHLGD MDFKVAGSRD GVTALQMDIK IEGITREIMQ VALNQAKGAR LHILGVMEQA ISTPRGDISE FAPRIYTMKI NPEKIKDVIG KGGSVIRALT DETGTTIEIE DDGTIKIAAT DGDKAKHAIR RIEEITAEIE VGRIYAGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE KVTDYLQMGQ DVPVKVMEVD RQGRIRLSIK EATTPDAEAP EAAAE
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