| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3993 |
|---|
| Symbol | infB |
|---|
| ID | 5802471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4245822 |
|---|
| End bp | 4248476 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641341778 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001608286 |
|---|
| Protein GI | 162418112 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.116527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG TAACCGTAAA ATCGCTGGCA GCAGAGATTC AGACCCCGGT TGATCGCCTG
GTACAGCAGT TTGCTGATGC AGGGATCAAG AAGTCTGACG TAGACTCAGT TACCCAGCAA
GAAAAAGAAA TACTGCTGGC ACACTTAAAC CGTGAACATG GTAGTGTGCC TAACAAACTC
ACGTTGCAAC GCAAAACGCG TAGCACCTTG AATATTCCGA GCACCGGCGG GAAAAGTAAA
TCGGTGCAAA TAGAGGTCCG CAAGAAACGC ACTTATGTAA ATACGCCGGA AGCTGAACAA
GCGAAAGCGG AAGAGCAGGC ACAACGTGAA GCGGAAGCCA CAGCGCAGAA AATCGCTGAA
GAAAAAGCTA AGCGTGAGGC TGAAGAACAA GCCAAACGTG AGGCCGCTGA AAAAGCTAAG
CGGCAAGCAG CGGAAAAAGA AAAAGTGACG AATCAACAAA CCGACGAAAA AACTAAGCCA
GCTCAGACCG ATAAAGCACG TCGTGAAGCT GAAGCTGCAG AGCTAAAACG CTCTGTAGAA
GAAGAAACAC GCCGTAAGGT CGAAGAAGAC GCCAAACGCG TTGCTGAGGA AGCCCGTAAA
ATGGCAGCCG AAAATGAAGG CAAATGGCCT GAGCCAGTGG CTGAGCAGAC TGAGTCTGCT
GACTATCATG TCACCACCTC ACAACATGCA CGCGCCGCGG AAGATGAAAA CGACGCCAAA
GTTGAAGGTG ATCGCCGCAG CCGTACTCGT GGTGGTAAAG CGACTAAACA GAAGAAAGGC
AACAAACTCT CTGAGTCTAA AGCTGATCGC GAAGAAGCAC GTGCTGTTGG CCGCAAAGGC
AAACGTAAAC CAAGCACATT ACAGCAGAGC TTTAACAAGC CTGTTGTTGC GGTGAACCGC
GATGTAGTGA TTGGCGAGAC AGTAACGGTT GCTGAATTAG CCAACAAAAT GGCGGTTAAA
GGCTCTCAGG TCATCAAAGC CATGATGAAA CTGGGTGCAA TGGCAACCAT TAACCAGGTT
ATCGATCAGG AAACAGCACA GCTGGTTGCT GAAGAGATAG GCCACAAAGT TATCCTGCGT
CGTGAGAACG AGCTGGAAGA AGCGCTGATG AGTGACCGTG ATATTGGTGT TGAAGCTGCC
GCTGAGCACC GCGCTCCGGT TGTGACCATC ATGGGCCACG TTGACCACGG TAAAACGTCT
TTACTGGATT ACATCCGCTC CACGAAAGTG GCGTCAGGTG AGGCCGGTGG TATTACTCAG
CATATCGGTG CTTATCACGT TGAAACTGAA AACGGCATGA TCACCTTCCT GGACACCCCA
GGACACGCCG CGTTTACATC AATGCGTGCT CGTGGTGCTC AGGCGACGGA TATCGTAGTA
CTGGTTGTTG CAGCGGACGA TGGCGTGATG CCACAAACTA TCGAAGCTAT TCAGCATGCT
AAAGCGGCGA ACGTGCCGGT TGTGGTTGCG GTGAATAAAA TCGATAAACC AGAAGCTGAT
CCAGATCGCG TTAAAACTGA ATTGTCTCAG TACGGTATCC AGCCTGAAGA GTGGGGCGGT
GAGTCTCAGT TCATCAACGT ATCAGCGAAA GCCGGTATCG GTATTGATGA ATTGTTGAAC
GCTATCCTTC TGCAAGCTGA AGTTCTGGAG CTGAAAGCCG TACGTACTGG TATGGCAAAC
GGTGTGGTTA TCGAATCCTT CCTGGACAAA GGCCGTGGCC CAGTGGCAAC CGTGCTGGTC
CAACAAGGTA CCTTGAACAA GGGCGATATC GTACTGTGTG GCTTTGAATA TGGCCGTGTC
CGTGCGATGC GTGATGAGTT AGGCCGCGAT ATTACTTCTG CGGGTCCGTC TATTCCGGTT
GAGATTCTGG GCTTGTCCAG TGTCCCTGCT GCCGGTGACG AAGTGACTGT TGTTCGTGAC
GAGAAAAAAG CCCGTGAAGT TGCACTGTAT CGTCAGGGCA AATTCCGTGA AGTTAAGTTG
GCTCGTCAGC AGAAATCTAA GCTGGAAAAC ATGTTTGCTA ACATGACCGA AGGTGAAGTT
TCTGAACTGA ACATTGTGAT CAAGTCTGAC GTACAGGGTT CTTGTGAAGC TATCTGCGAC
TCACTGGAAA AACTGTCTAC CGATGAAGTG AAAGTCCGGA TTGTTGGCTC AGGTGTTGGT
GGTATCACCG AAACTGATGC AACACTGGCC GCTGCATCTG GCGCAATCAT TCTTGGTTTT
AACGTTCGTG CTGATGCTTC CGCGCGTCGT GTAGTGGAAA CTGAAGGCTT GGATCTGCGT
TACTACTCAG TAATTTATAG CCTGATCGAC GAAGTGAAAC AGGCGATGAG TGGTATGCTG
GCACCTGAGT ACAAACAGCA AATCATTGGT CTGGCTGAAG TTCGTGACGT CTTTAAATCA
CCGAAATTTG GTGCCATTGC AGGTTGTATG GTTACCGAAG GTGTGATTAA GCGTAACAAT
CCAATCCGTG TTCTGCGTGA CAACGTGGTT ATCTATGAAG GCGAGCTGGA ATCCCTACGC
CGCTTCAAAG ATGACGTTAG CGAAGTTCGC AACGGCATGG AGTGTGGTAT CGGCGTTAAG
AACTACAATG ATGTGCGTAC CGGTGATGTG ATCGAAGTCT TCGAAATTAT CGAAATCAAA
CGTACCATTG CTTAA
|
|---|
| Protein sequence | MTDVTVKSLA AEIQTPVDRL VQQFADAGIK KSDVDSVTQQ EKEILLAHLN REHGSVPNKL
TLQRKTRSTL NIPSTGGKSK SVQIEVRKKR TYVNTPEAEQ AKAEEQAQRE AEATAQKIAE
EKAKREAEEQ AKREAAEKAK RQAAEKEKVT NQQTDEKTKP AQTDKARREA EAAELKRSVE
EETRRKVEED AKRVAEEARK MAAENEGKWP EPVAEQTESA DYHVTTSQHA RAAEDENDAK
VEGDRRSRTR GGKATKQKKG NKLSESKADR EEARAVGRKG KRKPSTLQQS FNKPVVAVNR
DVVIGETVTV AELANKMAVK GSQVIKAMMK LGAMATINQV IDQETAQLVA EEIGHKVILR
RENELEEALM SDRDIGVEAA AEHRAPVVTI MGHVDHGKTS LLDYIRSTKV ASGEAGGITQ
HIGAYHVETE NGMITFLDTP GHAAFTSMRA RGAQATDIVV LVVAADDGVM PQTIEAIQHA
KAANVPVVVA VNKIDKPEAD PDRVKTELSQ YGIQPEEWGG ESQFINVSAK AGIGIDELLN
AILLQAEVLE LKAVRTGMAN GVVIESFLDK GRGPVATVLV QQGTLNKGDI VLCGFEYGRV
RAMRDELGRD ITSAGPSIPV EILGLSSVPA AGDEVTVVRD EKKAREVALY RQGKFREVKL
ARQQKSKLEN MFANMTEGEV SELNIVIKSD VQGSCEAICD SLEKLSTDEV KVRIVGSGVG
GITETDATLA AASGAIILGF NVRADASARR VVETEGLDLR YYSVIYSLID EVKQAMSGML
APEYKQQIIG LAEVRDVFKS PKFGAIAGCM VTEGVIKRNN PIRVLRDNVV IYEGELESLR
RFKDDVSEVR NGMECGIGVK NYNDVRTGDV IEVFEIIEIK RTIA
|
|---|
| |