| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3984 |
|---|
| Symbol | rrmJ |
|---|
| ID | 5802462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4237811 |
|---|
| End bp | 4238452 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641341769 |
|---|
| Product | 23S rRNA methyltransferase J |
|---|
| Protein accession | YP_001608279 |
|---|
| Protein GI | 162419181 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000489521 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAAG AGATGTCTAA TAAAAAGCGT TCGGCTAGCT CCAGTCGCTG GTTACAAGAA
CACTTTAGCG ATAAATATGT AATTCAGGCA CAGAAAAAGG GGCTACGCTC TCGTGCCTGG
TTTAAACTTG ATGAAATACA ACAGAGCGAT AAACTTTTTA AACAGGGTAT GACAGTTGTT
GACCTAGGTG CAGCCCCTGG TGGTTGGTCC CAATATGCTG TAACCCAGAT TGGCAGTAAA
GGGCGAGTTA TCGCATGTGA TCTTCTACCA ATGGATCCTA TCGTTGGTGT CGATTTCCTT
CAGGGCGATT TTCGTGATGA ACTGGTCCTG AAAGCTTTAC TTGAGCGCGT TGGGGATAAA
AAAGTTCAGG TGGTCATGTG TGATATGGCC CCGAATATGA GTGGTACTCC GGCAGTCGAT
ATACCTAAAT CAATGTATCT GGTTGAATTA GCTTTAGATA TGTGTCGTGA TGTACTTGCA
CCAGGTGGAA GTTTCCTGGT GAAGGTGTTC CAGGGAGATG GCTTTGATGA ATACCTACGG
GAAATTCGCT CCCTGTTTAC GAAAGTTAAG ATTCGTAAGC CAGACGCTTC TCGTGCGCGA
TCGCGTGAAG TATACATTGT AGCGACAGGG CGGAAACTGT AG
|
|---|
| Protein sequence | MEKEMSNKKR SASSSRWLQE HFSDKYVIQA QKKGLRSRAW FKLDEIQQSD KLFKQGMTVV
DLGAAPGGWS QYAVTQIGSK GRVIACDLLP MDPIVGVDFL QGDFRDELVL KALLERVGDK
KVQVVMCDMA PNMSGTPAVD IPKSMYLVEL ALDMCRDVLA PGGSFLVKVF QGDGFDEYLR
EIRSLFTKVK IRKPDASRAR SREVYIVATG RKL
|
|---|
| |