Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3981 |
Symbol | dacB |
ID | 5802459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4235073 |
End bp | 4236521 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341766 |
Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
Protein accession | YP_001608276 |
Protein GI | 162418998 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000004834 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTTT CACGAATTGT CGGTGGATTG GCCTGTTCTA TCATACTCAA TATCAGTGTA TCTAATGCCA ATGCGGCTCA GGTCGAGAAT TACACTCAGT ATCTGCCTGA TGGGGCAAAT CTTGCGTTAA TGGTCCAAAA AATTGGGGCA TCAACCCCTG CAATAGACTA TCACGCTCAG CAGATGGCGC TACCGGCCAG TACGCAAAAA GTACTGACGG CCTTGGCAGC GTTATTGCAA CTCGGCCCAG ACTTTCGCTT CAATACTACC TTGGAAAGCC ATGGCACGAT TACTGATGGT GTGTTGCGAG GTAATTTAAT TGCCCGGTTT GGTGGTGACC CAACGTTAAC GCGTCAACAA CTGCGTAATA TGGTTGCGAC TCTCAGAAAA GCGGGGGTTA AACAGATCGC GGGGGATGTG GTGATTGATA CCTCAGTATT CGCCAGTCAT GACAAAGCAC CGGGTTGGCC ATGGAACGAT ATGACGCAAT GCTTTAGTGC GCCGCCTGCT GCTGCCATTG TTGATCGCAA CTGTTTTTCA GTCTCTCTTT ACAGTGCGCC CAATCCCGGC GATACCGCAT TTATCCGTGT CGCGTCTTAT TATCCGGTGC AAATGTTCAG TGAAGTCCGC ACGTTAGCCA AAGGCTCACC CGATGCACAA TATTGTGAGT TGGACGTCGT GCCAGGCGAA TTAAACCGGT TTACGCTTAC CGGTTGTCTG ACACAGCGCA GCGAACCTTT GCCATTGGCC TTTGCTGTGC AAAATGGGGC CAGCTACGCC GGGGCTATCT TAAAAGATGA ATTGAAAAAA GCTGATATTC AAATTGATGG CAATCTGCGC CGCCAAACAA TACCGAGTCC TGCGGGAAAC GTGCTAGCAC AGACCCAATC AGCCCCCTTA CATGATTTGC TGAAAATCAT GCTGAAAAAA TCAGACAATA TGATCGCTGA CACCGTCTTC AGAACCATTG GTCATCAGCG TTTTGGGGTT CCGGGTACTT GGCGCTCGGG TGCCGATGCC GTTCGCCAAA TTTTACGCCA AAAAGCAGGC GTTGATCTTG GTAACAGCAT TGTGGTGGAT GGATCTGGCC TATCGCGCCA TAATCTTATT TCACCAGCAA CAATGATGCA GGTTTTGCAA TATATTGCTC AAAATGATCA AGAGCTTAAT TTTATATCAA TGCTGCCTCT AGCAGGATAT GACGGTACTC TACGTTATCG TGGTGGCCTG CATGAAGCGG GGGTCAACGG TAAAGTTTCA GCGAAGACGG GTGCACTGCA AGGGGTTTAC AATCTTGCCG GTTTCATTAC TACCGCTAGT GGGCAACGTA TGGCATTTGT ACAATTTTTA TCCGGCTATG CCGTTCCACC TGAAGACCAA AAAAATCGCC GAGCCCCCTT GGTTCGATTT GAGAGCCGCC TCTATAAAGA TATTTATCAG AATAACTGA
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Protein sequence | MHFSRIVGGL ACSIILNISV SNANAAQVEN YTQYLPDGAN LALMVQKIGA STPAIDYHAQ QMALPASTQK VLTALAALLQ LGPDFRFNTT LESHGTITDG VLRGNLIARF GGDPTLTRQQ LRNMVATLRK AGVKQIAGDV VIDTSVFASH DKAPGWPWND MTQCFSAPPA AAIVDRNCFS VSLYSAPNPG DTAFIRVASY YPVQMFSEVR TLAKGSPDAQ YCELDVVPGE LNRFTLTGCL TQRSEPLPLA FAVQNGASYA GAILKDELKK ADIQIDGNLR RQTIPSPAGN VLAQTQSAPL HDLLKIMLKK SDNMIADTVF RTIGHQRFGV PGTWRSGADA VRQILRQKAG VDLGNSIVVD GSGLSRHNLI SPATMMQVLQ YIAQNDQELN FISMLPLAGY DGTLRYRGGL HEAGVNGKVS AKTGALQGVY NLAGFITTAS GQRMAFVQFL SGYAVPPEDQ KNRRAPLVRF ESRLYKDIYQ NN
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