| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3980 |
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| Symbol | basR |
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| ID | 5802458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4234405 |
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| End bp | 4235067 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641341765 |
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| Product | DNA-binding transcriptional regulator BasR |
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| Protein accession | YP_001608275 |
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| Protein GI | 162418181 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000564215 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAC TGATTGTTGA AGATGATGAA CTGCTACAAC GCGGTATAGC CATGGCGCTG
ACCAGTGAAG GCTATGTCTG CGACTGCGCA GCTACCGCCG CCGAGGCTCA CAGTTTGCTG
CAAACCAGTC AGTACAGCAT GATTATTCTT GATCTCGGCC TGCCGGATCA GGATGGTACT
CTGTTATTAC GTCAATGGCG TCGCCAACAT GTCACCCTGC CAGTACTCAT CCTCACCGCA
CGTGATGCGC TTGAAGACAG GGTTGACGGG CTGGATGCCG GTGCTGACGA TTATCTTGTC
AAACCTTTTG CCTTGGCTGA ATTACTGGCC CGGGTACGTG CTCTCATCCG CCGTTATCAG
GGGCAGAGTG ACAACCTGGT ACAGCAAGAT GACCTGAGCC TTAACTTGTC GACACAACAA
GTCTGTTTAC AAGGGCAGCC ATTAGAGATA ACCCCTAAAG AGTTTGCGAT CCTCTCACGT
CTAATCATGC GAGCTGGGCA AACAGTTAAC CGCGAGTTGT TACAACAGGA TCTATATACC
TGGAATGACG ACCTTAGCTC TAATACGCTG GAAGTTCATA TTCATAATTT GCGACGCAAA
CTGGGTAAAG ATCGTATCCG AACCGTTCGA GGTATTGGTT ATCGATTGGA AGCCTTATCA
TGA
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| Protein sequence | MKLLIVEDDE LLQRGIAMAL TSEGYVCDCA ATAAEAHSLL QTSQYSMIIL DLGLPDQDGT
LLLRQWRRQH VTLPVLILTA RDALEDRVDG LDAGADDYLV KPFALAELLA RVRALIRRYQ
GQSDNLVQQD DLSLNLSTQQ VCLQGQPLEI TPKEFAILSR LIMRAGQTVN RELLQQDLYT
WNDDLSSNTL EVHIHNLRRK LGKDRIRTVR GIGYRLEALS
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