Gene YpAngola_A3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3963 
Symbol 
ID5802441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4216646 
End bp4220563 
Gene Length3918 bp 
Protein Length1305 aa 
Translation table11 
GC content52% 
IMG OID641341749 
Producthypothetical protein 
Protein accessionYP_001608259 
Protein GI162418694 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGG TAAAGAGACT CAGTATTGCA TTCTTGCTGA TTATCCTGCT ATTGGTCGGT 
GCTCTGGGGG GGTTACTCGG TACGACCAGT GGGTTACATT TTTTAATCAA CAGCGCCGCC
CGCTGGGTAC CTGGGCTTGA TATTGCCAGT GTTAGTGGTG GCTGGCGTGG TCTCACCTTA
ACGGGCATTC AGTATCAAAT GCCCGGCGTC ACGGTCAAAG CTGGGCAATT TTATCTGTCA
TTGCAGCTCT CTTGTCTGAA GAATAGTGAG CTATGTGTTA ACGCACTGAC AGCACAAGAT
ATTGATGTGG TGGTGAATAC TCAAGCGATG CCACCTACGT CATCCACGCC AGCCAGTACT
GACCCCATGG GGGAACTGAG TACCCCATAT CCCATTTTCT TACGTTTGCT GTCACTGAAT
AACGTCAAAG TGACCATTGA TGATACGGCT ATTTCACTGG ATGAATTCCG TACTGGTGCG
CATTGGAAGC AACGTTCATT GGCTTTGATG CCGACAAAAA TCAACGGGTT ATTGATCGCA
TTACCCAAAA CGGTGTCAGC CGGGGTTCCC GATGCGGTGA AGCCTGCGGT TGAAACTGCT
ATGGCCGCCA AAGAGGCGGT TGCGCAATTA TCAGCGGCTC CTGGACGATC AGCCACTGCA
TCAGGGCAAT CAACCACTGC GTCAGGACGA TCAGCTACTG CGTCAGGGCA ATCAGCCACT
ACCGGGGGTC AACTGGCTAC GGTCCCAGCA GAACCGGCGA CCCCACTGGG TGAAAGTTTA
AAAGCGCTAT TTGCCAAACC ATTGCTACCG GCATTGCCGG ACTTCCGTCT ACCGCTGGAT
TTGCAGATTG AAGAGATCTC AGGGCAACAG CTTAGGCTGA CCGGGGATAA CGAGGTCCTT
ATCAGCAGCT TGTTACTGCA GGCCAGTACA CAAGATCAAC GGATAACACT GGATACGCTG
GAGATCAAAT CGCCGCAGGG CGGGTTGTCG GCGCAGGGGC AAGCGACATT GGCGGATAAG
TGGCCGCTGG ATCTGGTGGT CAATAGTGCG TTGAACATTG ACTCGCTGAA AGGCGAAAAA
GTGAAATTGA CCGTCGGTGG GGCGCTGCGT GAGGAACTCA AGGTCACGCT CAATCTGTCA
GGGCCGGTCA GTGCGCAACT GGAGACAGAA ACGTCGCTGG CAAAGGCAGG TTTGCCGTTG
TCGCTGACTC TGCAGAGCAA ACAACTGCGC TGGCCGTTGA CTGGCGAGCC CCAATACCAA
ATGAATAACC TCAGGATGCG CCTCAATGGG CAAGCGACGG ATTATGCGCT TTCTATCCGT
TCTGATATCA AAGGTACTGA TCTACCGCCA GCGGTATTCA CGCTGGAGGG TAAAGGCAAT
GTTGAGCAAT TTAATCTGAC GCGTTTACGT CTGGCGGCGT TGCAAGGTCA CACTGACCTG
ACTGGGGTAG TGGATTGGCG GCAAGCGATC AGTTGGAATT CGGTACTCAC CTTATCGGGC
ATCAATATGG CCAAACAGTG GCCTGAATGG CCAGCAAAAT TGGAGGGTAA GATTGTTACC
CGCGGCAGTA TTCATGGCGG TAGCTGGCAA TTGCAGGTTC CGGAGCTGGT ACTTGATGGC
AATGTGAAAC AGAATCGCGT GACCGCCCGC GGGTCTCTGA CCGGTAATGC GGCGGGCCAA
TGGCATATTC CTGGTATCAA TCTGGCGTTG GGCCGTAATA AGCTTGATAT GAAAGGGGAG
TTGAACGACA ACTGGCTGTT GGATGCTAAT GTCGATGCGC CACAACTTGA TGGCGCGTTG
CCCGGTCTGG GTGGTGTAGT GAAAGGGTCG CTGAAATTAC GCGGTAACCT GAAAACGCCG
CAACTGCTGG CTGATCTCAC GGCTAACCGC CTGCAATGGC AAGAGTTGCA CATCAATCGT
ATTAAAGTGG ATGGCGATGT CCGTTCGACA GATCAAATTC AAGGCCAGTT GGCGGTCAGA
GTTGAACAGC TTAAGCAAGC TGATTTTGTG GTCAGTTTGT TGACGTTGGA TGCCCGTGGC
AGTGAAAAAC AGCATCAGTT GCGTCTGAAT ATGCAAGGGG ATCCTGTCTC CGGCCAATTG
TCGCTGGAGG GCAGCTTCGA CAAACAACAA CAGCGTTGGC GCGGTACTCT CAATAACACG
CGCTTTGATA CCCCAGTGGG GGAATGGCGT TTAAGCCGTG CAATGACACT GGATTATCAG
AACAGCGCGC AACGGATCAC CATCGGCCCC CACTGTTGGC TTAATCCCAA TGCTGAGCTT
TGTGCGCCCC GGCCAATTGA AGCTGGCCCC AGTGGGCAGG CAAGTGTGGT ACTCAACCGC
TTTGATTTAG CGATGATCAA ACCGTTCCTC GGCCCGGATA CCACCATGAA CGGTGTGTTT
ACTGGCCGGG CAGAGGTCAG TTGGAAAGAG GGCGGTAAGT TACCTGATGT GCGGGTATCA
CTCAGTGGTA ATGGCGTGAA AGTACAACAA ATGGTGCAGG GCAGCCCACT GCCGATTGCC
TTTGAAACCC TGAACCTGAA TGGCGGGCTG GCGAATGGGC AAGTGCGCGC CGACTGGTTG
GTCAAGCTCG TCAATAACGG GCAGTTCTCT GGGCAGGTGC AAGTTGCAGA CCCAGAAGGG
CGGCGCAACT TATCCGGTAA TGTAGCCATA AGTAATCTCT CTCTGGCGAT GATTAACCCG
ATTCTGAGTG ATGGTGAAAA AGCGGCTGGC ATATTGAATG CGAATCTGCG TTTGGCAGGG
AATGCGAAAA GTCCGCTCGT CTATGGCCGC CTGGCACTGG ATAAGGTGGA TATTGATGGC
AGTTGGATGC CATTCGATAT CACCGAAGGG CGCTTGGCGA TGAATTTTGA TGGCATGACA
TCGACGCTGG AGGGGTTGAT ACGGACTTCC CAAGGGCAGT TGAATCTCTC CGGCGATGCG
GACTGGCGTG ATATTAGCGC CTGGCATGCC AGAATTGCGG CCAAGGGCAA CAAGTTACGG
GTTACGATCC CGCCGACGGC GCGAGTCGAT GTTTCACCGG ATATTGTTTT CGAAGCCACG
CCGCAGTTAT TTACGCTCAA TGGTTCGGTC GATATTCCTT GGGCGCGCAT CACCGTGCAG
GAAGTGCCCG AAACAGCGGT TGGCGTCTCC TCGAATGAGG TTATGCTCAA TGACCAATTG
CAGCCTATTG CGCCACGGAG CGCCAGTATT CCGATCAGCA GTAATTTGGT GATTCGGATC
GGTAACGATG TTCGTTTGAA TGCATTTGGT TTGAAAGCCC GCTTGCAGGG CGATTTGAGA
ATGATGCAGG ATCAGCGTGG GTTAGGGCTG AATGGGCAAA TTAATATTCC GTCCGGTAGC
TTCCGCGCTT ATGGTCAGGA CCTCATCGTC AACAAAGGAA TATTGCTGTT CTCTGGCCCA
CCAGATCAGC CGCTACTTAA TATTGAAGCG ATCCGAAATC CTGACTCTAC CGCTAATGGT
GTTATTGCCG GAGTACGTGT TACGGGGATG GCAGATTCCC CGCGCATGGA GGTATTCTCT
GATCCGGCAA TGTCTCAACA GGAGGCCTTA TCTTATCTGT TGCGTGGCCA GGGGCTTGGC
AATTCGGGGG CTGACAGCAG TATGATGACC TCAATGTTGA TCGGCATGGG GGTGGCACAA
AGTGGTAAAT TGGTGGGTAA AATCGGTGAG GCATTTGGTG TCAGTAATCT GGCATTAGAT
ACTCAAGGGG TCGGTGATAG CTCACAAGTG GTCGTGAGTG GTTACGTCAC CAAAGACCTG
CAAATAAAAT ATGGTGTGGG TATATTTGAC TCACTGGCTA CGTTAACGTT ACGTTATCGG
TTGATGCCCA GGTTGTATCT GGAAGCGGTG TCTGGTATTG ATCAGGCATT AGATTTGCTT
TATCAGTTTG AGTTTTAA
 
Protein sequence
MKWVKRLSIA FLLIILLLVG ALGGLLGTTS GLHFLINSAA RWVPGLDIAS VSGGWRGLTL 
TGIQYQMPGV TVKAGQFYLS LQLSCLKNSE LCVNALTAQD IDVVVNTQAM PPTSSTPAST
DPMGELSTPY PIFLRLLSLN NVKVTIDDTA ISLDEFRTGA HWKQRSLALM PTKINGLLIA
LPKTVSAGVP DAVKPAVETA MAAKEAVAQL SAAPGRSATA SGQSTTASGR SATASGQSAT
TGGQLATVPA EPATPLGESL KALFAKPLLP ALPDFRLPLD LQIEEISGQQ LRLTGDNEVL
ISSLLLQAST QDQRITLDTL EIKSPQGGLS AQGQATLADK WPLDLVVNSA LNIDSLKGEK
VKLTVGGALR EELKVTLNLS GPVSAQLETE TSLAKAGLPL SLTLQSKQLR WPLTGEPQYQ
MNNLRMRLNG QATDYALSIR SDIKGTDLPP AVFTLEGKGN VEQFNLTRLR LAALQGHTDL
TGVVDWRQAI SWNSVLTLSG INMAKQWPEW PAKLEGKIVT RGSIHGGSWQ LQVPELVLDG
NVKQNRVTAR GSLTGNAAGQ WHIPGINLAL GRNKLDMKGE LNDNWLLDAN VDAPQLDGAL
PGLGGVVKGS LKLRGNLKTP QLLADLTANR LQWQELHINR IKVDGDVRST DQIQGQLAVR
VEQLKQADFV VSLLTLDARG SEKQHQLRLN MQGDPVSGQL SLEGSFDKQQ QRWRGTLNNT
RFDTPVGEWR LSRAMTLDYQ NSAQRITIGP HCWLNPNAEL CAPRPIEAGP SGQASVVLNR
FDLAMIKPFL GPDTTMNGVF TGRAEVSWKE GGKLPDVRVS LSGNGVKVQQ MVQGSPLPIA
FETLNLNGGL ANGQVRADWL VKLVNNGQFS GQVQVADPEG RRNLSGNVAI SNLSLAMINP
ILSDGEKAAG ILNANLRLAG NAKSPLVYGR LALDKVDIDG SWMPFDITEG RLAMNFDGMT
STLEGLIRTS QGQLNLSGDA DWRDISAWHA RIAAKGNKLR VTIPPTARVD VSPDIVFEAT
PQLFTLNGSV DIPWARITVQ EVPETAVGVS SNEVMLNDQL QPIAPRSASI PISSNLVIRI
GNDVRLNAFG LKARLQGDLR MMQDQRGLGL NGQINIPSGS FRAYGQDLIV NKGILLFSGP
PDQPLLNIEA IRNPDSTANG VIAGVRVTGM ADSPRMEVFS DPAMSQQEAL SYLLRGQGLG
NSGADSSMMT SMLIGMGVAQ SGKLVGKIGE AFGVSNLALD TQGVGDSSQV VVSGYVTKDL
QIKYGVGIFD SLATLTLRYR LMPRLYLEAV SGIDQALDLL YQFEF