| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3956 |
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| Symbol | cpdB |
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| ID | 5802434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4208024 |
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| End bp | 4209994 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641341742 |
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| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein |
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| Protein accession | YP_001608252 |
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| Protein GI | 162419157 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.997098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAG CCATGTTCAA GCGTCCGCTG ACGTTATCCC TCCTTGCCAG CCTGATTGCT
GTCGCGACAT CACTGTCTGC TGCCACTGTT GATTTACGAG TATTGGAAAC CACCGACCTA
CACAGCAACA TGATGGATTT TGATTACTAC AAAGATAAAC CCACGGAAAA ATTCGGGCTG
GTACGCACTG CCAGCTTGAT TATCGCAGCC CGGCAACAAG CCACTAACAG CGTGCTGGTG
GATAACGGTG ACGTGATCCA GGGGAGTCCG CTTGGTGATT ATATCGCGGC TAAAGGGTTA
AACGACGGAG AGATTCACCC AGTCTATAAA GCGATGAACA CGCTGGATTA TGCGGTCGGC
AATATCGGTA ACCATGAGTT TAACTATGGG CTGGACTACC TGAAGAAATC ACTGGCAGGG
GCGAAATTCC CGTATGTTAA CGCCAACGTG ATTGATGTTA AAACAGGTAA ACCCTTGTTC
CAGCCTTACC TGATCATCGA TACCCCAGTG AAAGATCGTG ACGGAAAGAG CCATAACCTG
CGGATCGGGT ACATTGGTTT TGTACCGCCT CAAGTGATGA TCTGGGATAA AGCGAATCTG
AGTGGCAAAG TCACGGTGAA CGATATCACT GAAACCGCCA AGAAGTGGGT ACCGGAGATG
CGTGAACAAG GGGCTGATCT GGTTGTTGCT ATCCCGCACT CTGGTCTTTC CAGCGATCCT
TATAAAACCA TGGCTGAAAA TTCGGTTTAT TACCTCAGTC AAGTTCCAGG TATCGATGCC
ATCATGTTCG GCCACGCACA TGGTGTGTTC CCCAGCAAAG ATTTTGCCGC CATCAAAGGC
GCGGATATCA CTCAAGGTAC CTTAAACGGT ATTCCGGCAG TGATGCCTGG CCAATGGGGT
GACCATTTAG GCGTAGTCGA TTTTGTCCTG AATAATGATC AGGGAAAATG GCAAGTTATC
GATGCCAAGG CTGAAGCCCG TCCTATCTAC GATAAAACAG CACAAAAATC ACTGGCGGCA
GAAAATGCCA AACTGGTGGA AGTACTGGCA GTTGATCACC AGAGCACCCG TGATTTTGTC
AGCCAACCGA TTGGTAAAGC ATCAGATAAC ATGTACAGCT ATCTGGCACT GATCCAAGAT
GACCCCACCG TGCAGATTGT GAATAACGCC CAGCGCGCGT ATACCGAACA TTTTATTCAG
GGCGATCCTG ATTTAGCTGA CCTCCCGGTA CTGTCTGCCG CTGCACCGTT TAAAGCCGGT
GGCCGCAAAA ATGATCCCAC CAGTTTTGTT GAGGTGGAAA AAGGGAAGCT GACCTTCCGT
AACGCCGCGG ATTTGTACCT TTATCCAAAT ACACTCGTCG TCGTGAAAGC CAGTGGGGCT
GAGGTTAAGC AGTGGCTGGA GTGTTCCGCC GCACAGTTTA ATCAAATCGA TATTAACAGC
AGCAAACCGC AATCGTTGAT TAATTGGGAT GGTTTTCGTA CTTATAATTT CGATGTCATC
GATGGTGTTG AGTATGAAAT TGATGTCAGC CAGCCTGCCC GCTACGATGG CGAATGTACG
CTAATCAACG ACCAGGCAGA ACGTATCAAA AACCTGACGT TTAACGGTAA GCCAATCGAT
CCGAAAGCCA CATTCCTGAT TGCCACCAAT AACTACCGCG CTTACAGCGG TAAGTTTGCC
GGTACCGGTG ACAGCCATAT CGCATTCGCT TCACCCGACG AAAATCGAGC GGTCCTGTCT
GCATATATCA GTGCTGAAAC CAAGAAAAAG GGTCAGGTCA TCCCGCAAGC CGACAACAAT
TGGCGTCTGG CAATTCTTGA TAGCAAGCAA CCTTTGGATA TTCGTTTTGA AACCTCTCCA
ACTGCTAAGG CCGCTGATTT TATTAAACAA AAAGCGCAAT ACCCAATGGA AGCACAGGGT
ACAGATGAAG TTGGCTTCGC CGTTTATCAC ATCGATTTAC AGAGAAAGTA A
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| Protein sequence | MEKAMFKRPL TLSLLASLIA VATSLSAATV DLRVLETTDL HSNMMDFDYY KDKPTEKFGL
VRTASLIIAA RQQATNSVLV DNGDVIQGSP LGDYIAAKGL NDGEIHPVYK AMNTLDYAVG
NIGNHEFNYG LDYLKKSLAG AKFPYVNANV IDVKTGKPLF QPYLIIDTPV KDRDGKSHNL
RIGYIGFVPP QVMIWDKANL SGKVTVNDIT ETAKKWVPEM REQGADLVVA IPHSGLSSDP
YKTMAENSVY YLSQVPGIDA IMFGHAHGVF PSKDFAAIKG ADITQGTLNG IPAVMPGQWG
DHLGVVDFVL NNDQGKWQVI DAKAEARPIY DKTAQKSLAA ENAKLVEVLA VDHQSTRDFV
SQPIGKASDN MYSYLALIQD DPTVQIVNNA QRAYTEHFIQ GDPDLADLPV LSAAAPFKAG
GRKNDPTSFV EVEKGKLTFR NAADLYLYPN TLVVVKASGA EVKQWLECSA AQFNQIDINS
SKPQSLINWD GFRTYNFDVI DGVEYEIDVS QPARYDGECT LINDQAERIK NLTFNGKPID
PKATFLIATN NYRAYSGKFA GTGDSHIAFA SPDENRAVLS AYISAETKKK GQVIPQADNN
WRLAILDSKQ PLDIRFETSP TAKAADFIKQ KAQYPMEAQG TDEVGFAVYH IDLQRK
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