| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3940 |
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| Symbol | |
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| ID | 5802418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4188766 |
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| End bp | 4189473 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641341728 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001608238 |
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| Protein GI | 162420245 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.423213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAA TACAGTTTAT TTTATTTCGG CAAGAGGGCG TATTACGCAG TGATGGCGAG
CGCTATGTTA TACCTGCGGG AAAATTAGTG ATTGCCGATG AGCAGGCCAG TGCCTCTGCG
TTTGCAAACA GTGCCATCAC CTCTATATTA TGTTACCCAA TAGATCTTTT TCCGATATAT
CAGGATTTAG CCAGAAGAAC ATTACCGTTG AATAAAGGCC ATCTTCCTCA TGCGGTAAAT
GATAAATATA AAGTGTTGCC AGCGAATGTT GAAATTATAC AAGCCGCTGA AGAATTAATT
AATATAGAGC GTGTTGCCTC TTTGCGATTT CTTTATCTTT ATTGTTTAGG TATCGATAAC
GTTTATTTTT CCAAGCTGTT GGACTCCATT GTGGGTACGA ATAACGAACT ACTTGAGTTT
TTCGAAAAGA ATCGGCTCAA CCCATGGAGC GTTTCACGCT ATGCCAATGA ATTGGGTATT
TCGACCCGGA AATTGAATTT CCTGTTTTAT GAGAAATTCG GCATGTCGGC GAAACAGTGG
TTACTGGATC AGCGTTTGAA AAAGGGCTGT GAGCTATTAC TTTCGACCCG CTTACGGGTG
GCTGATATTG CCATGGAGTG TGGTTTTAGT AATCACGCGC ATTTCTCAGA TAGCTTTCGT
CGGCGCTTTC AACAATGCCC ATCGCATATG CGTTCACTTA TTGAATAG
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| Protein sequence | MKSIQFILFR QEGVLRSDGE RYVIPAGKLV IADEQASASA FANSAITSIL CYPIDLFPIY
QDLARRTLPL NKGHLPHAVN DKYKVLPANV EIIQAAEELI NIERVASLRF LYLYCLGIDN
VYFSKLLDSI VGTNNELLEF FEKNRLNPWS VSRYANELGI STRKLNFLFY EKFGMSAKQW
LLDQRLKKGC ELLLSTRLRV ADIAMECGFS NHAHFSDSFR RRFQQCPSHM RSLIE
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