Gene YpAngola_A3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3924 
SymboliclR 
ID5802402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4174799 
End bp4175641 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID641341713 
Producttranscriptional repressor IclR 
Protein accessionYP_001608223 
Protein GI162418169 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAC CGATTCCGAT TAAACGGGGA AAGAAACCCA AGGCAGCCAC ACAGAATACA 
CCTGCAGCAA CGGGCCAAGT TCAATCATTG ACTCGCGGCC TTAAATTGCT GGAATATATT
TCCGAATCTG ATGGGAACGT CGCCCTGACT GATTTAGCCC AACAGGCGGG ATTACCCAAT
TCGACCACCC ACCGTTTACT CACGACCATG CAACAGCAGG GTTTTGTTCG TCAGGTCGGC
GATTTAGGGC TATGGACCAT GGGGGCCCAC GCCTTTATTG TCGGGAGCAG TTTCCTGCAA
AGCCGTAATT TACTGGCGAT GGTCCACCCA ATGTTACGCC GTTTAATGGA TGAATCTGGC
GAAACCGTCA ATTTGGCGGT ACTCGATCAC AGCGATTACC AGGCAATAAT TATCGATCAA
GTGCAATGTA CCGCGCTGAT GCGGATGTCC GCACCAATTG GAGGCAAGCT CCCCATGCAT
GCCTCCGGGG CAGGCAAAGC CTTTCTCTCC ACCCTGCCGG ACGATCAACT GGTTCAGTTG
TTACATAAAA AGGGGTTGCA CGCTTACACC CAGCACACCC GTACCAATCC AACCAGCCTG
AAAGAAAATC TAGCGCTGAT CCGCAAGCAA GGTTATTCAT TTGATGATGA AGAGCACGCC
CTCGGCCTAC GTTGTATCGC CGCCTGCTTG TTCGATGAGC ACCACGAAGC CTTCGCCGCG
ATTTCTATCT CCGGCCCAAT ATCACGGATC ACCGACGATC GCGTCACCGA GCTGGGTGCA
CTGGTCATCC ACGCGGCGAA AGAGATTACC CAATCTTACG GTGGGGGAAC CGGGGTTAAA
TAA
 
Protein sequence
MALPIPIKRG KKPKAATQNT PAATGQVQSL TRGLKLLEYI SESDGNVALT DLAQQAGLPN 
STTHRLLTTM QQQGFVRQVG DLGLWTMGAH AFIVGSSFLQ SRNLLAMVHP MLRRLMDESG
ETVNLAVLDH SDYQAIIIDQ VQCTALMRMS APIGGKLPMH ASGAGKAFLS TLPDDQLVQL
LHKKGLHAYT QHTRTNPTSL KENLALIRKQ GYSFDDEEHA LGLRCIAACL FDEHHEAFAA
ISISGPISRI TDDRVTELGA LVIHAAKEIT QSYGGGTGVK