Gene YpAngola_A3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3923 
SymbolmetH 
ID5802401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4170889 
End bp4174581 
Gene Length3693 bp 
Protein Length1230 aa 
Translation table11 
GC content52% 
IMG OID641341712 
ProductB12-dependent methionine synthase 
Protein accessionYP_001608222 
Protein GI162421440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACAG TAATCGATAA TAAGGTCAAG GAATTGCACC AGCAGTTGGC GCAACGCATT 
TTGGTACTGG ATGGTGGTAT GGGCACCATG ATCCAGAGCT ACCGATTAGA AGAAGCAGAT
TACCGAGGCG CGCGTTTTGC TGACTGGGCA AGTGACCTAA AAGGTAACAA TGACCTCTTG
GTGCTCTCCA AGCCAGAAGT CATCACGGCG ATCCATAATG CCTACCTTGA AGCCGGTGCT
GACATTCTCG AAACCAATAC CTTTAACTCT ACCTCCATTG CGATGGCGGA CTATCAGATG
GCGTCACTGT CGGCTGAAAT TAACTATGAA GCCGCCCGTC TGGCCCGTAT CTGTGCCGAT
GAATGGAGCG CCCGCACGCC AGAAAAACCA CGTTATGTTG CCGGGGTGCT GGGGCCAACC
AACCGTACTG CCTCCATCTC CCCTAAAGTT AATGACCCGG CGTTCCGTAA CGTCAGTTTT
GATCAGTTGG TCGAGGCCTA TCGTGAGTCT ACCCGCGCGC TGATTGAAGG GGGTGTTGAT
TTAATTATGA TCGAAACGGT CTTCGATACG TTGAATGCGA AGGCCGCGAC CTTTGCGGTT
GAAAGCGAAT TCGAAGTGAT GGGCGTGCTG TTGCCGGTGA TGATTTCCGG CACCATTACC
GATGCCTCCG GCCGTACGCT GTCTGGTCAA ACGACGGAAG CTTTTTATAA CTCGCTGCGC
CATGTCAAAC CGCTGTCGTT TGGTCTGAAC TGTGCGCTGG GGCCGGATGA ACTGCGCCAA
TATGTTGCTG AGTTATCGCG TATCTCTGAA TATTATGTCA GTGCGCACCC GAATGCCGGT
TTGCCGAATG CTTTTGGTGA ATATGATCTG GAAGCCAAAG AGATGGCTGA GCAGATTGGC
GAGTGGGCAC GTGCCGGATT TTTGAATATT GTCGGCGGTT GCTGCGGTAC CACACCCCGG
CATATTGCGG CGATGGTCAA CGCTGTCGCT GGGGTGCCTC CGCGCCCGTT GCCTGATATT
CCGGTTGCCT GCCGTTTGGC CGGGCTGGAG CCACTGACTA TCGATGCCAA TACCCTGTTT
GTGAACGTCG GTGAGCGGAC CAACGTCACG GGTTCGGCAC GCTTTAAACG GCTGATAAAA
GAAGAGAAGT ACGGAGAGGC GCTGGATGTT GCCCGCCAAC AGGTCGAAAG CGGCGCGCAG
ATCATCGATA TCAACATGGA CGAAGGCATG TTGGATGCCG AAGCGGCCAT GGTGCGTTTC
CTTAATCTGA TTGCCGGGGA GCCTGATATT GCCAGGGTGC CGATTATGAT CGACTCCTCA
AGGTGGGATG TGATTGAAAA AGGCCTGAAA TGTATTCAAG GCAAAGGCAT CGTGAACTCC
ATTTCGATGA AAGAGGGCGT TGATGCCTTT ATTCATCACG CCAAACTGGT ACGCCGTTAT
GGTGCCGCCA TGGTGGTCAT GGCCTTTGAT GAAACCGGGC AAGCCGATAC CCGCGCACGC
AAAATCGAGA TTTGCCGCCG TGCGTATAAA ATATTGACGG AAACCGTCGG TTTCCCACCA
GAAGATATTA TCTTCGATCC GAATATTTTT GCCGTAGCGA CGGGGATTGA AGAGCATAAC
AATTATGCCG TCGATTTTAT TGAAGCCTGT GCCGATATCA AAGCCGAGTT GCCTCACGCG
CTGATTTCTG GCGGTGTCTC CAACGTTTCC TTCTCTTTCC GAGGGAATGA TCCAGTACGT
GAAGCCATTC ATGCAGTGTT CCTCTATTAC GCTATTCGCA ATGGCATGGA TATGGGGATT
GTTAACGCCG GTCAATTGGC GATTTATGAC GACCTGTCTG ATGAATTACG TGATGCGGTC
GAGGATGTGA TCCTCAACCG CCGTGATGAC AGTACTGAGC GCCTGCTGGA TTTAGCAGAA
AAATACCGTG ACAGTAAAAG TGGCGAGGTC GCGATCCAGC AAGCAGAATG GCGTGGTTGG
CCGGTGGTGA AACGGTTAGA GTATTCGCTG GTAAAAGGCA TTACTGAATT TATTGAGCTG
GATACCGAAG AAGCGCGCCA GCAGGCAGAT CGGCCAATTG AAGTGATTGA AGGGCCGTTA
ATGTCTGGGA TGAATGTGGT TGGTGACTTG TTTGGTGAAG GAAAAATGTT CCTGCCACAG
GTTGTAAAAT CAGCCAGGGT AATGAAACAG GCGGTGGCCT ATCTCGAACC TTATATTGAA
GCCAGTAAGC AGAAGGGTAC CACCGCCGGT AAAATCTTAT TAGCAACCGT CAAAGGCGAT
GTGCATGACA TCGGCAAGAA CATCGTGGGT GTGGTTTTGC AGTGTAATAA CTATGAAATC
ATCGATCTGG GCGTGATGGT GCCGACGGAA AAAATTCTGC GCACTGCACG GGAAGAGAAG
GTGGATATTA TCGGCCTGTC TGGTCTGATT ACCCCGTCGC TGGACGAGAT GGTTAACGTG
GCGAAAGAGA TGGAGCGCCA AGGCTTTACG CTGCCGTTGC TCATTGGTGG CGCAACGACA
TCCAAAGCTC ACACCGCGGT CAAGATTGAA CAAAATTATA GCGGTTCCAC CACGTATGTC
TCTAACGCCT CGCGCAGTGT GGGCGTGGTA TCTGCGTTGC TATCGGATAC GCAACGGGAG
GCATTTGTGG CAAAAACCCG CAAAGAATAT GAGACTGTAC GTATCCAACA CGCCCGTAAA
AAACCGCGCA CCCCGCCGGT CAGTTTGCAG GCTGCACGGA ATAACCCAAC GGTGATTGAT
TGGGAGAACT ACACTCCGCC AGTGGCCCAT AAATTGGGGG TACAGGTGGT GGAGGCCAGT
ATTGAAACTC TGCGCAACTA TATCGACTGG ACGCCATTCT TTATGACCTG GTCGTTGGCA
GGCAAGTATC CGCGCATTTT AGAAGATGAG GTGGTGGGGG AGGAGGCCAA GCGCCTGCTC
GCCGACGCCA ATGCTTTGTT GGATAAATTG TCCGCCGAGG ATCTGCTGCA TCCAAAAGGC
GTGGTTGGTC TGTTCCCGGC TAACAGCGTC GGCGATGATA TCGAAATTTA CCGTGATGAG
CGGCGAGATG AGGTACTGGC CATCAGCTAT CATTTACGCC AACAGACCGA AAAAACCGAC
TTCCCGAACT ACTGTTTAGC TGACTATGTC GCGCCTAAAT CCAGTGGTAA AGCCGATTAT
TTTGGTGCGT TTGCGGTGAC CGGTGGCTTG GAAGAAGACG CATTGGCCGA TGCTTATGAT
GCGCAACATG ATGACTACAA TAAAATCATG ATTAAGGCAT TATCAGACCG TCTGGCCGAA
GCCTTTGCCG AGTATCTGCA TGAGCGAGTA CGTAAAGTGT ATTGGGGTTT TGCACCGAAC
GAAAATCTGA GCAACGAAGA GTTGGTGCGC GAAAATTATC AGGGGATCCG CCCGGCACCG
GGCTATCCCG CTTGCCCGGA GCACACCGAG AAAGGCCAAA TTTGGCAGTT GTTGGATGTC
GAAACCCACA CCGGTATGAA ACTGACCGAA TCCTACGCCA TGTGGCCTGG GGCTTCGGTA
TCGGGTTGGT ATTTCAGCCA CCCAGACAGC AAATATTTTG CCGTAGCACA AATTCAGCGT
GATCAGGTTG AGGATTATGC CGCCCGTAAA GGGATGCCCA CTGCCGAAGT TGAACGCTGG
CTAGCCCCTA ATCTGGGTTA CGATGCGGAT TGA
 
Protein sequence
MDTVIDNKVK ELHQQLAQRI LVLDGGMGTM IQSYRLEEAD YRGARFADWA SDLKGNNDLL 
VLSKPEVITA IHNAYLEAGA DILETNTFNS TSIAMADYQM ASLSAEINYE AARLARICAD
EWSARTPEKP RYVAGVLGPT NRTASISPKV NDPAFRNVSF DQLVEAYRES TRALIEGGVD
LIMIETVFDT LNAKAATFAV ESEFEVMGVL LPVMISGTIT DASGRTLSGQ TTEAFYNSLR
HVKPLSFGLN CALGPDELRQ YVAELSRISE YYVSAHPNAG LPNAFGEYDL EAKEMAEQIG
EWARAGFLNI VGGCCGTTPR HIAAMVNAVA GVPPRPLPDI PVACRLAGLE PLTIDANTLF
VNVGERTNVT GSARFKRLIK EEKYGEALDV ARQQVESGAQ IIDINMDEGM LDAEAAMVRF
LNLIAGEPDI ARVPIMIDSS RWDVIEKGLK CIQGKGIVNS ISMKEGVDAF IHHAKLVRRY
GAAMVVMAFD ETGQADTRAR KIEICRRAYK ILTETVGFPP EDIIFDPNIF AVATGIEEHN
NYAVDFIEAC ADIKAELPHA LISGGVSNVS FSFRGNDPVR EAIHAVFLYY AIRNGMDMGI
VNAGQLAIYD DLSDELRDAV EDVILNRRDD STERLLDLAE KYRDSKSGEV AIQQAEWRGW
PVVKRLEYSL VKGITEFIEL DTEEARQQAD RPIEVIEGPL MSGMNVVGDL FGEGKMFLPQ
VVKSARVMKQ AVAYLEPYIE ASKQKGTTAG KILLATVKGD VHDIGKNIVG VVLQCNNYEI
IDLGVMVPTE KILRTAREEK VDIIGLSGLI TPSLDEMVNV AKEMERQGFT LPLLIGGATT
SKAHTAVKIE QNYSGSTTYV SNASRSVGVV SALLSDTQRE AFVAKTRKEY ETVRIQHARK
KPRTPPVSLQ AARNNPTVID WENYTPPVAH KLGVQVVEAS IETLRNYIDW TPFFMTWSLA
GKYPRILEDE VVGEEAKRLL ADANALLDKL SAEDLLHPKG VVGLFPANSV GDDIEIYRDE
RRDEVLAISY HLRQQTEKTD FPNYCLADYV APKSSGKADY FGAFAVTGGL EEDALADAYD
AQHDDYNKIM IKALSDRLAE AFAEYLHERV RKVYWGFAPN ENLSNEELVR ENYQGIRPAP
GYPACPEHTE KGQIWQLLDV ETHTGMKLTE SYAMWPGASV SGWYFSHPDS KYFAVAQIQR
DQVEDYAARK GMPTAEVERW LAPNLGYDAD