Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3923 |
Symbol | metH |
ID | 5802401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4170889 |
End bp | 4174581 |
Gene Length | 3693 bp |
Protein Length | 1230 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641341712 |
Product | B12-dependent methionine synthase |
Protein accession | YP_001608222 |
Protein GI | 162421440 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACAG TAATCGATAA TAAGGTCAAG GAATTGCACC AGCAGTTGGC GCAACGCATT TTGGTACTGG ATGGTGGTAT GGGCACCATG ATCCAGAGCT ACCGATTAGA AGAAGCAGAT TACCGAGGCG CGCGTTTTGC TGACTGGGCA AGTGACCTAA AAGGTAACAA TGACCTCTTG GTGCTCTCCA AGCCAGAAGT CATCACGGCG ATCCATAATG CCTACCTTGA AGCCGGTGCT GACATTCTCG AAACCAATAC CTTTAACTCT ACCTCCATTG CGATGGCGGA CTATCAGATG GCGTCACTGT CGGCTGAAAT TAACTATGAA GCCGCCCGTC TGGCCCGTAT CTGTGCCGAT GAATGGAGCG CCCGCACGCC AGAAAAACCA CGTTATGTTG CCGGGGTGCT GGGGCCAACC AACCGTACTG CCTCCATCTC CCCTAAAGTT AATGACCCGG CGTTCCGTAA CGTCAGTTTT GATCAGTTGG TCGAGGCCTA TCGTGAGTCT ACCCGCGCGC TGATTGAAGG GGGTGTTGAT TTAATTATGA TCGAAACGGT CTTCGATACG TTGAATGCGA AGGCCGCGAC CTTTGCGGTT GAAAGCGAAT TCGAAGTGAT GGGCGTGCTG TTGCCGGTGA TGATTTCCGG CACCATTACC GATGCCTCCG GCCGTACGCT GTCTGGTCAA ACGACGGAAG CTTTTTATAA CTCGCTGCGC CATGTCAAAC CGCTGTCGTT TGGTCTGAAC TGTGCGCTGG GGCCGGATGA ACTGCGCCAA TATGTTGCTG AGTTATCGCG TATCTCTGAA TATTATGTCA GTGCGCACCC GAATGCCGGT TTGCCGAATG CTTTTGGTGA ATATGATCTG GAAGCCAAAG AGATGGCTGA GCAGATTGGC GAGTGGGCAC GTGCCGGATT TTTGAATATT GTCGGCGGTT GCTGCGGTAC CACACCCCGG CATATTGCGG CGATGGTCAA CGCTGTCGCT GGGGTGCCTC CGCGCCCGTT GCCTGATATT CCGGTTGCCT GCCGTTTGGC CGGGCTGGAG CCACTGACTA TCGATGCCAA TACCCTGTTT GTGAACGTCG GTGAGCGGAC CAACGTCACG GGTTCGGCAC GCTTTAAACG GCTGATAAAA GAAGAGAAGT ACGGAGAGGC GCTGGATGTT GCCCGCCAAC AGGTCGAAAG CGGCGCGCAG ATCATCGATA TCAACATGGA CGAAGGCATG TTGGATGCCG AAGCGGCCAT GGTGCGTTTC CTTAATCTGA TTGCCGGGGA GCCTGATATT GCCAGGGTGC CGATTATGAT CGACTCCTCA AGGTGGGATG TGATTGAAAA AGGCCTGAAA TGTATTCAAG GCAAAGGCAT CGTGAACTCC ATTTCGATGA AAGAGGGCGT TGATGCCTTT ATTCATCACG CCAAACTGGT ACGCCGTTAT GGTGCCGCCA TGGTGGTCAT GGCCTTTGAT GAAACCGGGC AAGCCGATAC CCGCGCACGC AAAATCGAGA TTTGCCGCCG TGCGTATAAA ATATTGACGG AAACCGTCGG TTTCCCACCA GAAGATATTA TCTTCGATCC GAATATTTTT GCCGTAGCGA CGGGGATTGA AGAGCATAAC AATTATGCCG TCGATTTTAT TGAAGCCTGT GCCGATATCA AAGCCGAGTT GCCTCACGCG CTGATTTCTG GCGGTGTCTC CAACGTTTCC TTCTCTTTCC GAGGGAATGA TCCAGTACGT GAAGCCATTC ATGCAGTGTT CCTCTATTAC GCTATTCGCA ATGGCATGGA TATGGGGATT GTTAACGCCG GTCAATTGGC GATTTATGAC GACCTGTCTG ATGAATTACG TGATGCGGTC GAGGATGTGA TCCTCAACCG CCGTGATGAC AGTACTGAGC GCCTGCTGGA TTTAGCAGAA AAATACCGTG ACAGTAAAAG TGGCGAGGTC GCGATCCAGC AAGCAGAATG GCGTGGTTGG CCGGTGGTGA AACGGTTAGA GTATTCGCTG GTAAAAGGCA TTACTGAATT TATTGAGCTG GATACCGAAG AAGCGCGCCA GCAGGCAGAT CGGCCAATTG AAGTGATTGA AGGGCCGTTA ATGTCTGGGA TGAATGTGGT TGGTGACTTG TTTGGTGAAG GAAAAATGTT CCTGCCACAG GTTGTAAAAT CAGCCAGGGT AATGAAACAG GCGGTGGCCT ATCTCGAACC TTATATTGAA GCCAGTAAGC AGAAGGGTAC CACCGCCGGT AAAATCTTAT TAGCAACCGT CAAAGGCGAT GTGCATGACA TCGGCAAGAA CATCGTGGGT GTGGTTTTGC AGTGTAATAA CTATGAAATC ATCGATCTGG GCGTGATGGT GCCGACGGAA AAAATTCTGC GCACTGCACG GGAAGAGAAG GTGGATATTA TCGGCCTGTC TGGTCTGATT ACCCCGTCGC TGGACGAGAT GGTTAACGTG GCGAAAGAGA TGGAGCGCCA AGGCTTTACG CTGCCGTTGC TCATTGGTGG CGCAACGACA TCCAAAGCTC ACACCGCGGT CAAGATTGAA CAAAATTATA GCGGTTCCAC CACGTATGTC TCTAACGCCT CGCGCAGTGT GGGCGTGGTA TCTGCGTTGC TATCGGATAC GCAACGGGAG GCATTTGTGG CAAAAACCCG CAAAGAATAT GAGACTGTAC GTATCCAACA CGCCCGTAAA AAACCGCGCA CCCCGCCGGT CAGTTTGCAG GCTGCACGGA ATAACCCAAC GGTGATTGAT TGGGAGAACT ACACTCCGCC AGTGGCCCAT AAATTGGGGG TACAGGTGGT GGAGGCCAGT ATTGAAACTC TGCGCAACTA TATCGACTGG ACGCCATTCT TTATGACCTG GTCGTTGGCA GGCAAGTATC CGCGCATTTT AGAAGATGAG GTGGTGGGGG AGGAGGCCAA GCGCCTGCTC GCCGACGCCA ATGCTTTGTT GGATAAATTG TCCGCCGAGG ATCTGCTGCA TCCAAAAGGC GTGGTTGGTC TGTTCCCGGC TAACAGCGTC GGCGATGATA TCGAAATTTA CCGTGATGAG CGGCGAGATG AGGTACTGGC CATCAGCTAT CATTTACGCC AACAGACCGA AAAAACCGAC TTCCCGAACT ACTGTTTAGC TGACTATGTC GCGCCTAAAT CCAGTGGTAA AGCCGATTAT TTTGGTGCGT TTGCGGTGAC CGGTGGCTTG GAAGAAGACG CATTGGCCGA TGCTTATGAT GCGCAACATG ATGACTACAA TAAAATCATG ATTAAGGCAT TATCAGACCG TCTGGCCGAA GCCTTTGCCG AGTATCTGCA TGAGCGAGTA CGTAAAGTGT ATTGGGGTTT TGCACCGAAC GAAAATCTGA GCAACGAAGA GTTGGTGCGC GAAAATTATC AGGGGATCCG CCCGGCACCG GGCTATCCCG CTTGCCCGGA GCACACCGAG AAAGGCCAAA TTTGGCAGTT GTTGGATGTC GAAACCCACA CCGGTATGAA ACTGACCGAA TCCTACGCCA TGTGGCCTGG GGCTTCGGTA TCGGGTTGGT ATTTCAGCCA CCCAGACAGC AAATATTTTG CCGTAGCACA AATTCAGCGT GATCAGGTTG AGGATTATGC CGCCCGTAAA GGGATGCCCA CTGCCGAAGT TGAACGCTGG CTAGCCCCTA ATCTGGGTTA CGATGCGGAT TGA
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Protein sequence | MDTVIDNKVK ELHQQLAQRI LVLDGGMGTM IQSYRLEEAD YRGARFADWA SDLKGNNDLL VLSKPEVITA IHNAYLEAGA DILETNTFNS TSIAMADYQM ASLSAEINYE AARLARICAD EWSARTPEKP RYVAGVLGPT NRTASISPKV NDPAFRNVSF DQLVEAYRES TRALIEGGVD LIMIETVFDT LNAKAATFAV ESEFEVMGVL LPVMISGTIT DASGRTLSGQ TTEAFYNSLR HVKPLSFGLN CALGPDELRQ YVAELSRISE YYVSAHPNAG LPNAFGEYDL EAKEMAEQIG EWARAGFLNI VGGCCGTTPR HIAAMVNAVA GVPPRPLPDI PVACRLAGLE PLTIDANTLF VNVGERTNVT GSARFKRLIK EEKYGEALDV ARQQVESGAQ IIDINMDEGM LDAEAAMVRF LNLIAGEPDI ARVPIMIDSS RWDVIEKGLK CIQGKGIVNS ISMKEGVDAF IHHAKLVRRY GAAMVVMAFD ETGQADTRAR KIEICRRAYK ILTETVGFPP EDIIFDPNIF AVATGIEEHN NYAVDFIEAC ADIKAELPHA LISGGVSNVS FSFRGNDPVR EAIHAVFLYY AIRNGMDMGI VNAGQLAIYD DLSDELRDAV EDVILNRRDD STERLLDLAE KYRDSKSGEV AIQQAEWRGW PVVKRLEYSL VKGITEFIEL DTEEARQQAD RPIEVIEGPL MSGMNVVGDL FGEGKMFLPQ VVKSARVMKQ AVAYLEPYIE ASKQKGTTAG KILLATVKGD VHDIGKNIVG VVLQCNNYEI IDLGVMVPTE KILRTAREEK VDIIGLSGLI TPSLDEMVNV AKEMERQGFT LPLLIGGATT SKAHTAVKIE QNYSGSTTYV SNASRSVGVV SALLSDTQRE AFVAKTRKEY ETVRIQHARK KPRTPPVSLQ AARNNPTVID WENYTPPVAH KLGVQVVEAS IETLRNYIDW TPFFMTWSLA GKYPRILEDE VVGEEAKRLL ADANALLDKL SAEDLLHPKG VVGLFPANSV GDDIEIYRDE RRDEVLAISY HLRQQTEKTD FPNYCLADYV APKSSGKADY FGAFAVTGGL EEDALADAYD AQHDDYNKIM IKALSDRLAE AFAEYLHERV RKVYWGFAPN ENLSNEELVR ENYQGIRPAP GYPACPEHTE KGQIWQLLDV ETHTGMKLTE SYAMWPGASV SGWYFSHPDS KYFAVAQIQR DQVEDYAARK GMPTAEVERW LAPNLGYDAD
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