Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3905 |
Symbol | |
ID | 5802383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4148733 |
End bp | 4149230 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641341696 |
Product | hypothetical protein |
Protein accession | YP_001608206 |
Protein GI | 162420185 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA ATAAGCAAAG CAGTGTTGCC CCAAAAGAAA GGATTAACAT CAAGTATGTG CCGAATACTG GCGACCAGGT TGCAGAAATT GAATTACCGC TGAATCTGCT GGTTGTGGGT GATCTTAAAG GCGTGCGTGA AGAGACTTCA ATTGAAGAGC GTCAGGTTGT TTCGGTCAAT AAGAATAACT TCAACTCAGT CATGAACGAA GCAAATATCA GTCTGAGTTT CAATGTGCCT AATCGCCTTG AAGGTGATGG GGAAGAAGAC ATGCCGGTCG CCTTGTCGAT CAAGGGTCTT GATGATTTCT CGCCTGACAA TGTGGCGAAA AAAGTTCCAG AGCTCAAAAA AATTCTGGAA CTACGGGAAG CGTTAGTGGC ATTGAAAGGG CCATTGGGGA ATATCCCAGC TTTCCGCTCT CGTCTACAGG ATTTGCTTGG CAATGAAGAT ATGCGCGAGC AGTTGCTGAA AGAATTGGAC ATTCTTAATC AAAAATAA
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Protein sequence | MSKNKQSSVA PKERINIKYV PNTGDQVAEI ELPLNLLVVG DLKGVREETS IEERQVVSVN KNNFNSVMNE ANISLSFNVP NRLEGDGEED MPVALSIKGL DDFSPDNVAK KVPELKKILE LREALVALKG PLGNIPAFRS RLQDLLGNED MREQLLKELD ILNQK
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