Gene YpAngola_A3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3905 
Symbol 
ID5802383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4148733 
End bp4149230 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID641341696 
Producthypothetical protein 
Protein accessionYP_001608206 
Protein GI162420185 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA ATAAGCAAAG CAGTGTTGCC CCAAAAGAAA GGATTAACAT CAAGTATGTG 
CCGAATACTG GCGACCAGGT TGCAGAAATT GAATTACCGC TGAATCTGCT GGTTGTGGGT
GATCTTAAAG GCGTGCGTGA AGAGACTTCA ATTGAAGAGC GTCAGGTTGT TTCGGTCAAT
AAGAATAACT TCAACTCAGT CATGAACGAA GCAAATATCA GTCTGAGTTT CAATGTGCCT
AATCGCCTTG AAGGTGATGG GGAAGAAGAC ATGCCGGTCG CCTTGTCGAT CAAGGGTCTT
GATGATTTCT CGCCTGACAA TGTGGCGAAA AAAGTTCCAG AGCTCAAAAA AATTCTGGAA
CTACGGGAAG CGTTAGTGGC ATTGAAAGGG CCATTGGGGA ATATCCCAGC TTTCCGCTCT
CGTCTACAGG ATTTGCTTGG CAATGAAGAT ATGCGCGAGC AGTTGCTGAA AGAATTGGAC
ATTCTTAATC AAAAATAA
 
Protein sequence
MSKNKQSSVA PKERINIKYV PNTGDQVAEI ELPLNLLVVG DLKGVREETS IEERQVVSVN 
KNNFNSVMNE ANISLSFNVP NRLEGDGEED MPVALSIKGL DDFSPDNVAK KVPELKKILE
LREALVALKG PLGNIPAFRS RLQDLLGNED MREQLLKELD ILNQK