Gene YpAngola_A3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3890 
Symbol 
ID5802368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4127454 
End bp4128257 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content47% 
IMG OID641341681 
ProductTonB domain-containing protein 
Protein accessionYP_001608191 
Protein GI162419416 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.544733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAT TACAGCAGAG CAGTGACAAA CTTATATTTT GGCTAGTCGG GGCCTTATTA 
GCGTGTGGTA TCCATATTTA TGCACTTTGG TGGCTGAGTA CCGCATCTAT ACCAGCAATA
CCCACCAGCT ACCCCGCCGC AATAATGATG GAGCTTTCAG CCGAACCGGA ATTTATGCAA
AACTTGCCAC AAAACTCAGT GGTGGGCATA ACGCAGAATA TTATCGAGCC TGCGGTTGAG
CAACGGGTCA ACCAGCCGGA TGACATTGTC GATTTACCTA CGCTGCCTGA ACAACCAGAG
GGGCAACGGG AGATTACGAG AAAAGAGCCA ATAAAGGTCA AACGGCCAGC TGAAAATAGA
GCGACATCGC GTAAACCGGT TAATAAAGAA ACACAAGAAA GTGACAGTAA ACAATCCTCA
CCAGCCGCTG CAGCCAGTGC AATGCTTTCA GGGACGAGCC AACAAGTTGC CGCAGCGGTA
AACAGTGACT CATCCCACCG TCAGCAAGCT CAAGTGAGTT GGAAAAGTCG TTTACAGGGG
CATTTAATGG GGTTTAAGCG TTACCCATCC AGTGCCAGAA AACAGCAACA GCAAGGGACT
GCCATGATTC GATTTGTAGT CGATAAAAAT GGTTATGTGT CATCAGTGCA ACTGAGTCAC
AGTAGTGGTA CATCCGCTTT AGATCGCGAG GCGTTAGCGA TTATCAAGCG CGCTCAGCCA
TTACCGAAAC CGCCTGCTGA GTTGTTATCG CAGGGGCAGA TAACATTATC TCTGCCCGTT
GATTTTAATC TAAAAAGGAA ATAA
 
Protein sequence
MNRLQQSSDK LIFWLVGALL ACGIHIYALW WLSTASIPAI PTSYPAAIMM ELSAEPEFMQ 
NLPQNSVVGI TQNIIEPAVE QRVNQPDDIV DLPTLPEQPE GQREITRKEP IKVKRPAENR
ATSRKPVNKE TQESDSKQSS PAAAASAMLS GTSQQVAAAV NSDSSHRQQA QVSWKSRLQG
HLMGFKRYPS SARKQQQQGT AMIRFVVDKN GYVSSVQLSH SSGTSALDRE ALAIIKRAQP
LPKPPAELLS QGQITLSLPV DFNLKRK