Gene YpAngola_A3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3885 
Symbol 
ID5802363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4121122 
End bp4121973 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content44% 
IMG OID641341677 
Productmaltose/maltodextrin ABC transporter permease 
Protein accessionYP_001608187 
Protein GI162418824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.321948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT CACAAAGTAT TAAACAAGAG AAATGGATCC GTTTATCGCT CTCTTGGCTG 
GTTATTATTC TGGTATCGGT CATTATTATT TACCCACTGA TTTGGACGGT GGGTGCATCA
CTGAACGCCG GTAATAGCCT GCTCAGTACG TCGATAATTC CTGAGAATCT GTCCTTCCAG
CACTACGCCG ATCTGTTTAA CGGCGAGGTG AATTATATGA CCTGGTACTG GAACTCGATG
AAAATTAGTT TTTTGACCAT GGTCTTAACG CTGATCAGTG TCAGTTTCAC CGCCTATGCA
TTCTCCCGTT TTCGTTTTAA AGGGCGTCAG AATGGGTTAA TGCTTTTTCT GTTGCTGCAA
ATGATTCCGC AATTTTCTGC ACTGATTGCC ATTTTTGTGC TTTCGCAATT GTTGGGCTTA
ATTAACAGCC ATATGGCTCT GGTACTGATT TATGTCGCGG GCATGATCCC AATGAATACC
TATTTAATGA AAGGGTATCT CGACGCGATC CCAAAAGATC TTGATGAGTC GGCACGTATG
GATGGGGCCA GTAATTTCCG TATCTTTATT GAAATTATCA TGCCGCTTTC TAAACCTATT
GTGGCCGTGG TGGCGTTATT TTCCTTTACC GGCCCATTGG GTGATTTTAT TTTGTCGAGC
ACGATTTTAC GTACTCCCGA TAAATATACG TTACCGATTG GTTTATATAA CCTCGTGGCG
CAAAAAATGG GCGCTAGCTA TACCACTTAC GCTGCGGGAG CCGTATTAAT TGCAGTCCCC
GTTGCTATTC TCTACCTGGC CCTACAGAAA TATTTTGTTT CCGGCCTAAC GTCAGGAAGT
ACTAAGGGAT AA
 
Protein sequence
MAKSQSIKQE KWIRLSLSWL VIILVSVIII YPLIWTVGAS LNAGNSLLST SIIPENLSFQ 
HYADLFNGEV NYMTWYWNSM KISFLTMVLT LISVSFTAYA FSRFRFKGRQ NGLMLFLLLQ
MIPQFSALIA IFVLSQLLGL INSHMALVLI YVAGMIPMNT YLMKGYLDAI PKDLDESARM
DGASNFRIFI EIIMPLSKPI VAVVALFSFT GPLGDFILSS TILRTPDKYT LPIGLYNLVA
QKMGASYTTY AAGAVLIAVP VAILYLALQK YFVSGLTSGS TKG