Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3880 |
Symbol | rbsC1 |
ID | 5802358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4113812 |
End bp | 4114816 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341672 |
Product | sugar transport system permease |
Protein accession | YP_001608182 |
Protein GI | 162419041 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0490565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTGA CACGGACCAG TAAATTCAGG AAGGCCATTC ATCAATACGG GATCATACTT GCCTTTGTTG GCTTGTGTGC GGTCATTGCT CTGGCTGGTG AATTTGCAGT AAACAGCGGG ACATGGAGCG AGAATTATTT TTTATCACGG GATAATACAC TCATTATTCT GCGCCAGGTC TCGATCAACG GCATCCTGGC CATTGGGATG ACGTTCGTTA TTATCACCGC GGGTGTTGAT CTCTCCGTTG GCGCGGTTTT AGGCTTGGCC GGTATTGTCG CCGCGCGTTT TGCGACGAAT AACAGTGCCA TCGCCTTAGG GGGGACCGAT TGGCCACTGT TAGTACCCAT CGTGATTGCC ATTGGCATCG GTTTAGTCTG CGGCGCTATC AATGGCTTTA TCTTAGGCAA ATATCGTCTG CAACCCTTTA TTGTCACAAT GGGGATGTTA TCTGTCGCCC GTGGCCTGAC ATTACTGACT ACTGGCGGAA ACCCGGTATC ACAATTAACC GATGAATTCC GTTGGTTAGG TAACGGTTAT ATTTTGGGTA TTCCCGTACC GGTGTTGATC TTTATTATTC TGTTCGCCAT TGCCTGGTTT GTCTTGAATA AGATGACGTT TGGCCGTTAC GTCTACGCGG TGGGCGGGAA TGAAAAAAGT GCCCGCACAT CCGGGATCAA CGTATTACGT ATTAAAGTGG CGGTATATAC CCTTTGCGGT ATTTTGGCGG CGATCGCGGG TTTAATTTTA ACCGCACGTA CTGGCTCGGC ACAAACTGGC GCTGGCGTAT CCTATGAATT GGATGCTATC GCGGCGGTCG TTATTGGCGG CACCAGTATG GCTGGCGGTA TTGGAACTCT GCGCGGAACC TTATTTGGTG TGCTGATAAT AGGTGTGATG AACAATGGGC TTGATTTACT CGGCGTACAA TCCTATTACC AGCAAATTAT CAAAGGTGTT CTGATTGTCT TTGCTGTCAT GCTTGACCCA TCCCGTAAGC AATAA
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Protein sequence | MSLTRTSKFR KAIHQYGIIL AFVGLCAVIA LAGEFAVNSG TWSENYFLSR DNTLIILRQV SINGILAIGM TFVIITAGVD LSVGAVLGLA GIVAARFATN NSAIALGGTD WPLLVPIVIA IGIGLVCGAI NGFILGKYRL QPFIVTMGML SVARGLTLLT TGGNPVSQLT DEFRWLGNGY ILGIPVPVLI FIILFAIAWF VLNKMTFGRY VYAVGGNEKS ARTSGINVLR IKVAVYTLCG ILAAIAGLIL TARTGSAQTG AGVSYELDAI AAVVIGGTSM AGGIGTLRGT LFGVLIIGVM NNGLDLLGVQ SYYQQIIKGV LIVFAVMLDP SRKQ
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