Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3851 |
Symbol | lysS |
ID | 5802329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4088333 |
End bp | 4089850 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341646 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001608157 |
Protein GI | 162420680 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0982146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC AAAAACCACA AGTCGCTGAG CAAGCGCAAG AACTCAATAG TGAGTTACAA GCCCGTCGAG AAAAACTGGC TGTCTTACGG GGAAAGGGAA TTGCATTCCC TAATGATTTC CGCCGTGAGA ACCTTTCCGA CCAGTTGCAT GCCGAGTTTG ACAGTAAAGA GAATGAAGAG TTAGAAGCAC TGAATATCGA CGTAACCGTT GCTGGCCGTA TGATGACCCG CCGTATCATG GGTAAAGCAT CATTTGTGAC TCTGCAAGAT GTTGGTGGCC GTATCCAGTT GTACGTTTCC CGTGATGACC TACCGGAAGG CGTTTATAAC GAAGAATTCA AAAAGTGGGA CCTGGGCGAT ATCCTGGGTG CGCGCGGTAA ACTGTTTAAA ACCAAAACCG GTGAGCTGTC GATCCACTGT AGCGAACTGC GTCTGTTGAC CAAGGCTCTG CGTCCATTGC CAGATAAATT CCATGGCTTA GCTGACCAGG AAACCCGTTA CCGCCAGCGT TATTTGGATC TGATTGCTAA CGACGAGTCT CGTCATACTT TCAAAGTCCG TTCGCAAGTG ATGTCCGGTA TCCGTAGCTT CATGGTTGAA AAAGGCTTCA TGGAAGTCGA AACGCCAATG ATGCAAGTGA TCCCTGGCGG CGCTTCCGCA CGTCCGTTTG TCACGCATCA CAATGCGTTG GATATCGATA TGTATTTGCG TATCGCGCCA GAGCTGTATC TGAAACGTCT GGTCGTGGGG GGCTTCGAAC GTGTGTTCGA AATCAACCGT AACTTCCGCA ACGAAGGGGT TTCGCCACGT CATAACCCAG AGTTCACCAT GATGGAACTC TATATGGCTT ATGCGGACTA TAAAGACCTG ATCGTCTTGA CGGAAGAGCT ATTCCGCACT CTGACCGAAA CCATATTGGG GAGCAGTGTG GTGCAATATG GCGAACAGAC TTTTGATTTC GGTAAGCCTT TTGCCAAATT GACCATGAAA GAAGCTATTT GTAAATATCG TCCTGAAACC AATGTCGCGG ATTTAGACGA TATGGATAAA GCCGTCGCAA TTGCCGAATC ATTGGGTATC AAGGTTGAGA AGAGCTGGGG CCTGGGTCGT ATTCAATGTG AAATCTTTGA AGAGACCGCA GAAAGTCATC TTATCCAGCC AACGTTCATC ACAGAATATC CAGCCGAGGT TTCTCCGCTA GCACGCCGTA ATGACGATAA TCCATTTATC ACTGACCGCT TTGAATTCTT CATCGGTGGC CGTGAAATTG GTAATGGCTT CTCTGAGTTG AACGATGCCG AAGACCAGGC GCAGCGTTTC GCCGATCAGG TAAGTGCTAA AGAAGCTGGC GATGATGAAG CGATGTTCTA CGATGAAGAC TATATCACTG CATTGGAACA TGGCTTACCA CCAACCGCAG GGCTAGGTAT TGGTATTGAC CGTATGGTTA TGTTGTTTAC CAATAGCCAT ACCATCCGTG ATGTCATTTT ATTCCCAGCG ATGCGCCCGG TAAAATAA
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Protein sequence | MSEQKPQVAE QAQELNSELQ ARREKLAVLR GKGIAFPNDF RRENLSDQLH AEFDSKENEE LEALNIDVTV AGRMMTRRIM GKASFVTLQD VGGRIQLYVS RDDLPEGVYN EEFKKWDLGD ILGARGKLFK TKTGELSIHC SELRLLTKAL RPLPDKFHGL ADQETRYRQR YLDLIANDES RHTFKVRSQV MSGIRSFMVE KGFMEVETPM MQVIPGGASA RPFVTHHNAL DIDMYLRIAP ELYLKRLVVG GFERVFEINR NFRNEGVSPR HNPEFTMMEL YMAYADYKDL IVLTEELFRT LTETILGSSV VQYGEQTFDF GKPFAKLTMK EAICKYRPET NVADLDDMDK AVAIAESLGI KVEKSWGLGR IQCEIFEETA ESHLIQPTFI TEYPAEVSPL ARRNDDNPFI TDRFEFFIGG REIGNGFSEL NDAEDQAQRF ADQVSAKEAG DDEAMFYDED YITALEHGLP PTAGLGIGID RMVMLFTNSH TIRDVILFPA MRPVK
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