Gene YpAngola_A3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3843 
Symbol 
ID5802321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4079261 
End bp4079959 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content49% 
IMG OID641341639 
ProductDNA-binding response regulator CreB 
Protein accessionYP_001608150 
Protein GI162420052 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.980313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAC TGATCTGGTT GGTAGAAGAT GAACCGAGTA TCGCTGATAC GTTGATTTAT 
ACGTTGGAAA GCGAAGGGTT TACCCTCCGG TGGTTTGATC GGGGGGAGCC TGCCCTTGCC
GCACTTAGCA GCGGTTCTCC CGCTTTGGCG ATAGTGGATG TTGGTTTGCC TGATATTAAT
GGCTTTGATC TGTGTCGCCG GATGCTGGCG GCAGCCCCCG ATCTGCCCGT GATCTTCCTG
ACAGCCCGTA GCGAAGAGTT GGACCGAATT GTGGGGCTGG AAATTGGTGC TGACGATTAT
ATTGCCAAAC CGTTCTCCCC CCGTGAGGTA AGTGCCCGAG TCCGTACCAT ATTGCGAAGA
TTACAAAAAT CACACTTATT GGCGGTTACC TCCACATCAT ATCAATTCGG TCATTTTTCG
CTGGATGAAG CCGGTGCCAG AGTGACCTAT CATCAACAGA TTTTAGGGTT AATCCGCTAT
GAATATCTGC TGTTGAAAAC CTTGTTACTG GCACCTGAAC GCATATTTTC ACGTCAACAA
TTAATGGATA TTGTCTGGGC GCAGGCGGAA GAAAGCCAAG ATCGCACGGT CGATACTCAC
ATCAAAACGC TACGATCAAA ATTACGCACG GTTTACGCTG AAGACTCACC CATTCGCACA
CATCGTGGAT TGGGCTATAG CCTGGGTTAT CAGCCATGA
 
Protein sequence
MKPLIWLVED EPSIADTLIY TLESEGFTLR WFDRGEPALA ALSSGSPALA IVDVGLPDIN 
GFDLCRRMLA AAPDLPVIFL TARSEELDRI VGLEIGADDY IAKPFSPREV SARVRTILRR
LQKSHLLAVT STSYQFGHFS LDEAGARVTY HQQILGLIRY EYLLLKTLLL APERIFSRQQ
LMDIVWAQAE ESQDRTVDTH IKTLRSKLRT VYAEDSPIRT HRGLGYSLGY QP