Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3838 |
Symbol | |
ID | 5802316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4075751 |
End bp | 4076452 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341634 |
Product | hemolysin III family protein |
Protein accession | YP_001608145 |
Protein GI | 162418903 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.69609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGAATA AATCAGGGAC ACAACCTCTC TTTGCAACAC CATCCGTACC CGCCGCACAA ACGGCCACCC CAACCCCGGC TTACCCGTGG GCTGAAGAGC TGGCGAACAG CCTCAGCCAT GGTATCGGTG TGGTGTTCGG TATTGTGGGG CTGGTATTGC TACTGGTTCA GGCGGTGAAC AGTGGTGCCG ATACCAAAGC GCTCACTAGC TATAGTTTGT ACGGTAGCAG TATCATTTTG TTGTTTTTGG CCTCTACGCT GTATCACGCC ATTCCACATC GTAGGGCGAA GCTCTGGCTG CAAAAATTTG ATCACTGCGC TATCTACATC TTGATTGCCG GGACTTATAC GCCGTTCTTA TTAGTAGGGC TAGATTCGCC TCTGGCCAGA GGTTTGATGG CGGTTATTTG GGGGCTGGCA CTCATCGGTG TGATCTTTAA GTTGGCGTTT GCTCATCGTT TTGAAGTGTT GTCACTGGTG ACCTATCTGA CCATGGGGTG GTTATCGCTG ATTGTCATTT ATCAGCTCGC GGTCAAGCTT GAGATCGGGG GGTTGGCACT GCTGGCGATA GGGGGCTTGT TATATACGGT TGGGGTGATC TTCTATGCAT CGAAACGTAT CCGTTTTGGT CATGCTATCT GGCACGGTTT TGTGTTAGGC GGCAGTGTCT GCCATTTTAT GGCGATCTAT CTATATGTTT AA
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Protein sequence | MKNKSGTQPL FATPSVPAAQ TATPTPAYPW AEELANSLSH GIGVVFGIVG LVLLLVQAVN SGADTKALTS YSLYGSSIIL LFLASTLYHA IPHRRAKLWL QKFDHCAIYI LIAGTYTPFL LVGLDSPLAR GLMAVIWGLA LIGVIFKLAF AHRFEVLSLV TYLTMGWLSL IVIYQLAVKL EIGGLALLAI GGLLYTVGVI FYASKRIRFG HAIWHGFVLG GSVCHFMAIY LYV
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