Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3822 |
Symbol | rpiA2 |
ID | 5802299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4056269 |
End bp | 4056925 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341619 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_001608131 |
Protein GI | 162419523 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0108055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAGG ATGAACTTAA AAAAGCGGTG GGCTGGGCAG CATTAGATTA CGTTAAACCC GGTACGATTG TGGGTGTCGG CACGGGTTCA ACTGCGGCGC ATTTTATTGA CGCGCTAGGC TCGATTAAAC ATCAGATCGA AGGGGCTGTT TCCAGTTCTG ATGCTTCAAC CGCCAAGCTG AAAAGCTATG GTATCCCAGT ATTTGATTGT AATGACGTTG ATGTATTGGA TATCTATGTT GATGGTGCTG ACGAAATTAA CGGCCAAATG CAGATGATTA AAGGCGGTGG CGCAGCACTG ACCCGAGAGA AGATTATTGC GGCTATCGCC CGGAAGTTTA TCTGTATTGC TGATGAATCC AAACAAGTTG GTGTGCTGGG TAAATTCCCC CTGCCAGTCG AAGTGATCCC GATGGCCCGC TCTTATGTGG CGCGTGAGCT GATTAAATTG GGTGGTTTGC CTGAATACCG TCAGAATGTC CTGACCGATA ACGGTAACGT TATTCTGGAT GTCCACAACT TGAGTATTTT GGATGCTATC GCTTTAGAGA ACCAAATTAA TGGCATTGCC GGTGTCGTAA CGGTGGGGCT ATTTGCGAAT CGCGGTGCTG ATGTGGCCCT GATTGGTACG GCCAATGGCG TTAAAGTGAT TGGCTAA
|
Protein sequence | MTQDELKKAV GWAALDYVKP GTIVGVGTGS TAAHFIDALG SIKHQIEGAV SSSDASTAKL KSYGIPVFDC NDVDVLDIYV DGADEINGQM QMIKGGGAAL TREKIIAAIA RKFICIADES KQVGVLGKFP LPVEVIPMAR SYVARELIKL GGLPEYRQNV LTDNGNVILD VHNLSILDAI ALENQINGIA GVVTVGLFAN RGADVALIGT ANGVKVIG
|
| |