Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3788 |
Symbol | |
ID | 5802265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4019100 |
End bp | 4019768 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641341586 |
Product | hypothetical protein |
Protein accession | YP_001608098 |
Protein GI | 162421291 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGTA ATACCGGGGA AGAGATGAAT ATTGATCATG GGGCCCGCCA GCCACAATCA GTCGGTGAAC GGCTACTGCT GTTGCTCAAA ACTCACGGCC CGCTACAAGC AGGTGAGGCG GGGAACATTT TGGGCACCAC CGGTGAAGCG GCGCGTCAGC AGTTTGTTAA ACTGGCCAAA AAAGGGCTAG TGGTGGCCGA AGCACAAACC CGCGGTGTGG GGCGGCCAAT TCAGTTATGG CAATTAACCG AGAGCGGTAA TACACATTTT CCTGATGCCC ATGGGGAGTT AGCTGTGCAA CTTTTGCGCT TAATTCGTAC ACAATTGGGC GATAACGCAC TGGAATTACT GATCGATAGC CGTGAACAGG AAACTCGCGA TCAATATTGT CAGGCGATGG TCGGGGTCAG TAATGTGGCT GAACGCGTCG AGCGGTTGGT GGCTATCCGC ACCGGTGAAG GATATATGGC ACAATCGCAG GTCGAGGCCG ATGGCACTAT TTTGTTGATC GAGAATCATT GCCCTATCTG GGCGGCGGCA GCCAGTTGCC AGCGTTTTTG CCGTACCGAA CTGGCGGTAT TCCAGCAAGC ATTGGGCGTG CCGGTTGAGC GGGTTGAACA TATTTTATCT GGTGCTCGTC GGTGTACTTA CCGCATTCAC CCCGAATAA
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Protein sequence | MFRNTGEEMN IDHGARQPQS VGERLLLLLK THGPLQAGEA GNILGTTGEA ARQQFVKLAK KGLVVAEAQT RGVGRPIQLW QLTESGNTHF PDAHGELAVQ LLRLIRTQLG DNALELLIDS REQETRDQYC QAMVGVSNVA ERVERLVAIR TGEGYMAQSQ VEADGTILLI ENHCPIWAAA ASCQRFCRTE LAVFQQALGV PVERVEHILS GARRCTYRIH PE
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