Gene YpAngola_A3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3788 
Symbol 
ID5802265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4019100 
End bp4019768 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID641341586 
Producthypothetical protein 
Protein accessionYP_001608098 
Protein GI162421291 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTA ATACCGGGGA AGAGATGAAT ATTGATCATG GGGCCCGCCA GCCACAATCA 
GTCGGTGAAC GGCTACTGCT GTTGCTCAAA ACTCACGGCC CGCTACAAGC AGGTGAGGCG
GGGAACATTT TGGGCACCAC CGGTGAAGCG GCGCGTCAGC AGTTTGTTAA ACTGGCCAAA
AAAGGGCTAG TGGTGGCCGA AGCACAAACC CGCGGTGTGG GGCGGCCAAT TCAGTTATGG
CAATTAACCG AGAGCGGTAA TACACATTTT CCTGATGCCC ATGGGGAGTT AGCTGTGCAA
CTTTTGCGCT TAATTCGTAC ACAATTGGGC GATAACGCAC TGGAATTACT GATCGATAGC
CGTGAACAGG AAACTCGCGA TCAATATTGT CAGGCGATGG TCGGGGTCAG TAATGTGGCT
GAACGCGTCG AGCGGTTGGT GGCTATCCGC ACCGGTGAAG GATATATGGC ACAATCGCAG
GTCGAGGCCG ATGGCACTAT TTTGTTGATC GAGAATCATT GCCCTATCTG GGCGGCGGCA
GCCAGTTGCC AGCGTTTTTG CCGTACCGAA CTGGCGGTAT TCCAGCAAGC ATTGGGCGTG
CCGGTTGAGC GGGTTGAACA TATTTTATCT GGTGCTCGTC GGTGTACTTA CCGCATTCAC
CCCGAATAA
 
Protein sequence
MFRNTGEEMN IDHGARQPQS VGERLLLLLK THGPLQAGEA GNILGTTGEA ARQQFVKLAK 
KGLVVAEAQT RGVGRPIQLW QLTESGNTHF PDAHGELAVQ LLRLIRTQLG DNALELLIDS
REQETRDQYC QAMVGVSNVA ERVERLVAIR TGEGYMAQSQ VEADGTILLI ENHCPIWAAA
ASCQRFCRTE LAVFQQALGV PVERVEHILS GARRCTYRIH PE