Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3766 |
Symbol | selA |
ID | 5802243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3993893 |
End bp | 3995281 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641341565 |
Product | selenocysteine synthase |
Protein accession | YP_001608077 |
Protein GI | 162418562 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG AAGCACACCC ATTATATCGC CAGTTACCGG CCATTGATCG CTTACTGAAT GAGCCTGAAA TGGCCCCTTT ATTGGCGGAG TATGGCCCCG TTCTTTTGGC CGATACCCTA CGTCAATTAC AGGCAGAAGC TCGTGAATAT ATCGGTCAAT TTCATACTCT GGCTGATTGG TGTGCGGACT GGCCTGCCGC TTTACGTCAA CGATTGAATC AACGGCAACC CGCGTTAAAA CCTGTGTTTA ATCTTACTGG CACGGTGCTG CACACCAATT TGGGCCGTGC ACCGCTGGCA GAATCTGCTA TCGCGGCGGT GACCGATGCC ATGCGAAGTG CGGTCACCTT GGAATACTCC TTAGAGGGCG CGGGCCGTGG GCACCGTGAT CGGGCTGTCG CCGATTTACT CTGTGCCCTG ACCGGTGCGG AAGATGCCTG TATCGTCAAT AACAATGCGG CGGCGGTCTT CTTGTTGTTA ACGGTCATGG CGGCGGGCAA GCAAGTCGTG GTCTCCCGTG GTGAACTGGT CGAGATTGGC GGTGCGTTTC GTATTCCTGA TGTCATGCGT CAGGCAGGGT GTGAGCTGGT CGAAGTGGGT ACCACGAACC GAACACATCT GAAAGATTAT CGGCAGGCCA TCAATGAAAA TACGGGTCTG CTGATGAAAG TTCATACCAG CAATTACAGT ATCGAGGGTT TCACGGCCGC AGTATCCGAA CAGCAACTGG CGGCATTGGG GCAAGAGTGT TCCATCCCGA CCGCGACCGA TTTAGGCAGT GGTTCGCTGG TGGATATGAC CCGTTACGGT TTACCCGCCG AGCCCATGCC ACAACAGTTG ATTGCGGCAG GCGTAGATTT AGTGACCTTC TCCGGTGATA AACTGTTAGG TGGGCCGCAA GCGGGGATCA TTCTCGGTAA AAAACAGTGG ATTGAGCGGT TACAGCAACA TCCGCTGAAG CGAGCATTGC GGGCCGATAA AATGACACTG GCAGCTTTGG ACGCCACCTT GCGCCTCTAT CAGCAGCCAG ATCGGTTGGT TGAACAACTG CCATCTCTGC GGCTACTGAC CCGCCCCGCC TCAGAGATTG CCGCGTGTGC ACAACGCCTG CTGGCCCCAC TGATTGCCTG TTATGGCACA GATTTCACTT TGGATATTGA ATCATGTTGG TCACAAATTG GCAGTGGTTC GCTGCCGGTT GATCGCTTGC CCAGTTGGGC GCTGACGTTT ACGCCTAAAG ATGGGCGCGG TAGTACATTG GAAGCCTTAA CGGCGCGTTG GCGCACACTG ACGAAGCCGG TCATTGGTCG TGTGGCTGAT GGGCGTTTGT GGCTGGATTT ACGCTGTCTG GAGGATGAGG CGGCGTTGCT AAGGGAATTG GCATCATGA
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Protein sequence | MSAEAHPLYR QLPAIDRLLN EPEMAPLLAE YGPVLLADTL RQLQAEAREY IGQFHTLADW CADWPAALRQ RLNQRQPALK PVFNLTGTVL HTNLGRAPLA ESAIAAVTDA MRSAVTLEYS LEGAGRGHRD RAVADLLCAL TGAEDACIVN NNAAAVFLLL TVMAAGKQVV VSRGELVEIG GAFRIPDVMR QAGCELVEVG TTNRTHLKDY RQAINENTGL LMKVHTSNYS IEGFTAAVSE QQLAALGQEC SIPTATDLGS GSLVDMTRYG LPAEPMPQQL IAAGVDLVTF SGDKLLGGPQ AGIILGKKQW IERLQQHPLK RALRADKMTL AALDATLRLY QQPDRLVEQL PSLRLLTRPA SEIAACAQRL LAPLIACYGT DFTLDIESCW SQIGSGSLPV DRLPSWALTF TPKDGRGSTL EALTARWRTL TKPVIGRVAD GRLWLDLRCL EDEAALLREL AS
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