| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3712 |
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| Symbol | oprC |
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| ID | 5802189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3932278 |
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| End bp | 3934338 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641341517 |
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| Product | TonB-dependent copper receptor OprC |
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| Protein accession | YP_001608029 |
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| Protein GI | 162418103 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCTG GGAAAAATAA AGTCTGTAAA AAGAAGTTAT TAGCGTGTGC GGTTACTTCG
GCTATTTCTG CCTTTGCTTC AAATGCCATT GCTTCAAATG CCATTGCCGA TACTACGAGT
CTGGCTGCAA TGAATCGCTC AGCCATTAAT ATATCAAGCA CGCATAACAG TAATAAAAAA
CTCAATGACG CTGATGTCAT CACGGTAACA GCCCCTCTGT ATTCGCCACT GGTGGTTGTC
ACATCGCCTA AAGTGCCCCG CCAGCCAGTA CCGGCCAGTG ACGGTACTGA TTATCTGAGG
ACCATTCCCG GTTTTTCACT TGTCCGTAAC GGGGGGACCA ATGGTGATGT GGTGTTCCGT
GGCATGTTCG GCTCACGGCT AAAAATTCTG ACCGATGGTG CTGAGATTTT GGGTACCTGC
CCATCGCGAA TGGATGCGCC AACCTCGTAT ATTTCACCAG AAAGTTTTGA TCTACTCACG
GTTGTCAAAG GGCCGCAATC GGTGCTGTGG GGGCCGGGGG TTTCTGCCGG GACCATTTTA
TTTGAACGGG AGCGCCCACA TTTTGACCAG TCTGGCGTCA AAGGTAATGC CAGTGTGTTA
GCCGGTTCTA ATGGGCGCTG GGATAAAAAT CTTGATGCCA GTTTGGGTAA CGAGCAGGGC
TATCTGCGGA TGATGGGGAA TCAGTCTCGG GCTGCTGATT ATAAAGACGG TAACAATGTT
CGCGTGCCCT CTCAATGGGA TAAGTGGAAT GCGGATATGG CGTTGGGCTG GACACCCGAT
ACCGATACAT TACTTGAGCT GTCGGTAGGA AAAGGGAATG GTGAAGCCCG TTATGGCGGT
CGCGGTATGG ATGGTTCTCA GTTCCTGCGT GAGAGCCTGG CGGCCCGTGT TGAGAAAAGT
AATATTGGCG AGGTGCTGGA TAAAATCGAA GCCAAAATTA ACTACACCTA CGTAGACCAT
ATTATGGATA ACAAGACCTT ACGTACCCCA CCGATGATGG CGATGTCTAG CAATCTGGAC
CGGCGGATGC TCGGCGGTCG GGTCATGGGG ACCTGGCTGT GGCAGGACCT AAAGCTGGAC
GCGGGTACCG ATATGCAAAC CAATACACAC CGCAAGAATA AACAGGGGAA CTGGGATAAA
AACGCCCGTT TCATGAATAA CGGGGTGTTC GGTGAGTTAA CCTGGGCGGC AAGTGAACAA
AATAAACTGA TCAGCGGGGC GCGTCTTGAC CGTCACCAAG TGACGAATTA TACCCGCGCA
GGTGAGCCGA CGCGCTCTGC TACCCTCCCC GCTGCCTTTA TGCGTGTTGA GCATAATCTG
GCTAATGCAC CGGTGATGTT GTATGCCGGC TTGGGGCATA CCGAGCGTTT TCCTGACTAT
TGGGAACTGT TTTCGCCAAA ATTCGGGCCA GCAGGCTCTA CTAGCGCCTT TGAGGGTGTA
AAAAGCGAAA AAACCACGCA GATTGATATC GGTGGCCAAT ACAGCGGTGA ACAATTTAGG
GGGTGGCTCT CCGCTTATAT TGGCCGGGTT AATGATTTTA TCCTGTTTAA ATATGATCCA
AAAAATCTAC GCATCAGCCA GGCCGATAAT ATTAACGCAA CCATTATGGG CGGCGAGATG
GGGATGGAAT ATGCCCTCAC CCCGTATTGG AAGGCTGATG CCAGTCTGGC TTATGCCTGG
GGGGAAAATA CCCGTGATAA CCGGCCATTG CCGCAAATTC CACCACTTGA GGCGCGGTTA
GGGCTGACAT TTGAAGCAGG CGACTGGAGC AGTTCCGCCT TATGGCGTTT GGTCAATAGC
CAGCACCGGG TGGCGATCAA CGAAGGGAAT GTCGTCGGTA AAGATTTTTC CAGCAGTGCG
GGGTTCGGCG TACTGTCGGC TAACGTCGCC TATAAGGTGA ATAAGCAAGT GAAGTTAAGT
AGCGGCATCG ATAATTTGCT GAATAAGGCT TACAGCGAAC ATCTTAATCT GGCGGGTAAT
AGCGGTTTTG GTTATTCAGT TAATACCCCT CTGAATGAGC CTGGCCGCAC TCTCTGGGCA
AAGCTAAACC TAACATTCTA A
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| Protein sequence | MISGKNKVCK KKLLACAVTS AISAFASNAI ASNAIADTTS LAAMNRSAIN ISSTHNSNKK
LNDADVITVT APLYSPLVVV TSPKVPRQPV PASDGTDYLR TIPGFSLVRN GGTNGDVVFR
GMFGSRLKIL TDGAEILGTC PSRMDAPTSY ISPESFDLLT VVKGPQSVLW GPGVSAGTIL
FERERPHFDQ SGVKGNASVL AGSNGRWDKN LDASLGNEQG YLRMMGNQSR AADYKDGNNV
RVPSQWDKWN ADMALGWTPD TDTLLELSVG KGNGEARYGG RGMDGSQFLR ESLAARVEKS
NIGEVLDKIE AKINYTYVDH IMDNKTLRTP PMMAMSSNLD RRMLGGRVMG TWLWQDLKLD
AGTDMQTNTH RKNKQGNWDK NARFMNNGVF GELTWAASEQ NKLISGARLD RHQVTNYTRA
GEPTRSATLP AAFMRVEHNL ANAPVMLYAG LGHTERFPDY WELFSPKFGP AGSTSAFEGV
KSEKTTQIDI GGQYSGEQFR GWLSAYIGRV NDFILFKYDP KNLRISQADN INATIMGGEM
GMEYALTPYW KADASLAYAW GENTRDNRPL PQIPPLEARL GLTFEAGDWS SSALWRLVNS
QHRVAINEGN VVGKDFSSSA GFGVLSANVA YKVNKQVKLS SGIDNLLNKA YSEHLNLAGN
SGFGYSVNTP LNEPGRTLWA KLNLTF
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