Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3658 |
Symbol | |
ID | 5802135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3885141 |
End bp | 3885827 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641341469 |
Product | hypothetical protein |
Protein accession | YP_001607981 |
Protein GI | 162420698 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACC TTTATTCGAT ACTCAGCATC GCGCTGTTAC TGGCCCCCGG TTCTGCCACT CACGGCCAAC TGCTTGCTAC CCCCACCCGT ATTGCGGTAG AGGCACAAGA GCTGAAGCGC ACCGTGCAGG TGTATAACAG CGGCGATACA CCGCTTTATC TGGATATCAC ATTACAACGT GTGGATAACC CTGGCGTGAA CCCTGAACGT AAAACACCCA TCAGTGAAAT CTCTCAACCT GAAATGATTT TTAATCCTAA CCGCATTACG TTAGGGCCGA GACAAAAGCG GGATATTACG CTGATCCCAC TCAAATCGCC GGTACAGGAA ACCCTTTACC GCCTGTATAT CAACCCCGTG CTCAATATCA AAGCGGTTGG CGATGGGGAG GATAAAAGTA AAGTTCATGC CCCGATGACC ATCAGCATTG GTTATGGCGT GCTGATTCAT CATTTGCCAC CGGCGGCGGC ACAAACTCGT CATTGGCAAC ATCAATGCTC AACCACTGGC GAGCTAACAC TCACCGCTAC CGGAACGGTA CACAGTAAGT TTAAGCAGCT CGAATCGGGC GGTAACGCCG CACTGGCCGA CAGTCTAAAC CTGTATCCGG GCACCGCGCT CACACTGCCC GTCAAACAAC TCAATGGTGA GGTGGACGGT GAAAAATTTA GTCTTCGCTG CCATTAG
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Protein sequence | MKYLYSILSI ALLLAPGSAT HGQLLATPTR IAVEAQELKR TVQVYNSGDT PLYLDITLQR VDNPGVNPER KTPISEISQP EMIFNPNRIT LGPRQKRDIT LIPLKSPVQE TLYRLYINPV LNIKAVGDGE DKSKVHAPMT ISIGYGVLIH HLPPAAAQTR HWQHQCSTTG ELTLTATGTV HSKFKQLESG GNAALADSLN LYPGTALTLP VKQLNGEVDG EKFSLRCH
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