Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3622 |
Symbol | |
ID | 5802098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3839800 |
End bp | 3841260 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341433 |
Product | putative transglycosylase |
Protein accession | YP_001607946 |
Protein GI | 162418487 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACACGCA TAAAATTAAG TTACTTTACC ATCGGTCTGG TTGCTCTGCT TCTGGCGCTT GCGCTGTGGC CCAATATTCC TTGGCGTAAT GGGCAAGAGG GCCAACTTGA CCAAATAAAA GCCCGTGGAG AACTGCGCGT CAGTACCATC AGTTCTCCTT TGATCTACTC TACCGAAAAG GATACCCCTT CCGGTTTTGA CTATGAGCTA GCAAAACGTT TTGCTGACTA TCTGGGGGTT AAACTGGTTA TCATCCCCCA TCATAATATT GACGATCTGT TTGACGCATT AGATAACGAT GACACCGATC TGCTAGCCGC TGGGCTGATT TATAACCGTG AACGCCTCAA TCGGGCGCGG ACTGGCCCTG CCTACTATTC TGTTTCTCAG CAATTGGTCT ACCGGCTGGG TTCGCCACGG CCTAAATCGT TCAGCGATCT GAAAGGTCAG GTGGTTGTGG CCTCCGGTTC GGCCCATATG ACCACACTAA AACGGCTTAA GCAGACAAAA TATCCTGAAC TCAATTGGAG TTCATCCGTC GATAAGTCCG GTAAAGAATT ACTGGAGCAA GTCGCGGAAG GTAAGCTCGA CTATACCCTT GGCGATTCAG CCACCATTGC CCTGTTACAA CGCATTCATC CGCAATTGGC AGTCGCATTT GATGTCACCG ATGAAGAGCC CGTCACCTGG TATTTTAAAC AGAGTGATGA CGATAGCCTG TATGCGGCCA TGCTCGATTT CTACAGTGAG ATGGTGGAAG ACGGTAGCCT CGCACGTCTG GAGGAGAAAT ATCTGGGTCA TGTGGGGAGT TTTGACTATG TTGATACCAA AACTTTCCTG TCCGCTATCG ATAATGTCCT GCCCTCTTAC CAGCACCTAT TTGAAAAACA TGCAGGGGAC ATTGACTGGA AATTGCTGGC CGTGATTGCC TATCAAGAAT CACATTGGAA CCCGCAAGCC ACCTCCCCTA CTGGTGTTCG TGGCTTGATG ATGCTAACCC GTGCGACCGC GGACGGGTTA GGGGTCAAGG ATAGGGTTGA CCCTGAAGAA AGCATCAGAG GCGGGGCTAT CTATTTGCAA CGGCTGATGA AAAAACTCCC TGAAACCATT CCAGAAGATG AACGCATCTG GTTTGCACTG GCTGCGTATA ATTTAGGCTA TGGTCATATG CTGGATGCCC GCCGTTTGAC TAAAAATCAG AACGGTAACC CAGACAGTTG GGTTGATGTG AAAATGCGTT TACCGATGCT AAGCCAAAAA CGCTACTACC CAAGCACCAC TTACGGTTAT GCCCGTGGTC ATGAAGCCTA TAACTATGTC GAGAATATTC GCCGTTATCA GGTCAGTCTG GTGGGATATT TACAGGAAAA AGAGAAAAAA GCGGCTCAAC ATGCCGCCAT TGAGGCGGAG CTGGGCAAAA GCAACCCGGT TGTCGGCCCC GGTTGGTCAA TCGGTGACTA A
|
Protein sequence | MTRIKLSYFT IGLVALLLAL ALWPNIPWRN GQEGQLDQIK ARGELRVSTI SSPLIYSTEK DTPSGFDYEL AKRFADYLGV KLVIIPHHNI DDLFDALDND DTDLLAAGLI YNRERLNRAR TGPAYYSVSQ QLVYRLGSPR PKSFSDLKGQ VVVASGSAHM TTLKRLKQTK YPELNWSSSV DKSGKELLEQ VAEGKLDYTL GDSATIALLQ RIHPQLAVAF DVTDEEPVTW YFKQSDDDSL YAAMLDFYSE MVEDGSLARL EEKYLGHVGS FDYVDTKTFL SAIDNVLPSY QHLFEKHAGD IDWKLLAVIA YQESHWNPQA TSPTGVRGLM MLTRATADGL GVKDRVDPEE SIRGGAIYLQ RLMKKLPETI PEDERIWFAL AAYNLGYGHM LDARRLTKNQ NGNPDSWVDV KMRLPMLSQK RYYPSTTYGY ARGHEAYNYV ENIRRYQVSL VGYLQEKEKK AAQHAAIEAE LGKSNPVVGP GWSIGD
|
| |