Gene YpAngola_A3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3620 
Symbol 
ID5802096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3838323 
End bp3839018 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641341431 
Producthypothetical protein 
Protein accessionYP_001607944 
Protein GI162420448 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01545] haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGTAA AGCAAGCAGA TGTTAGCGAT AGAAATAGGG CTGATGGGGT GGTTGAACCG 
CAATCAGCCG GGGCGAAACG CATTATCTTC TTTGATTTAG ATGGCACGTT ACATCAACAG
GATATGTTCG GCAGTTTTTT GCGTTTTCTA TTACGCCACT TGCCGCTTAA TCTGTTACTG
GTTATCCCGT TGCTACCACT GATTGGCGTA GGGCTCCTGG TGGGGGGGCG TTGTGCACGT
TGGCCGATGA GCCTCTTGTT GTGGGCGATG ACTTTTGGGC GACGGGAAGC ACATCTGCGC
GACCTGGAGT GGCGCTTTGT GGCCGCATTT CGCCAAAAAG TGACTGAATT CCCCGTGGTT
GCTATGCGCT TACGCCAGTA TCTGGAAAGC AGCGATGCAG AGGTGTGGTT AATCACCGGC
TCCCCACAGC GGCTGGTCGA ACAGGTTTAC CATGATTCAA ACTTTATACA CCGCTTACGG
TTGATAGGTA GCCGTATGGA ACGGCGCAAT GGGGGATGGG TGTTGCCACT GCGCTGTTTA
GGGCCTGAAA AAGTGGTGCA ATTAGAACAG CGTCTGGGGT CTCCACTGAA GTTATATAGT
GGGTACAGCG ACAGTAAGCA GGATAATCCG CTGTTAGCTT TTTGCGAACA CCGCTGGCGG
GTAAGTAAAA CCGGCGAATT ACAGCAATTG GAGTAG
 
Protein sequence
MSVKQADVSD RNRADGVVEP QSAGAKRIIF FDLDGTLHQQ DMFGSFLRFL LRHLPLNLLL 
VIPLLPLIGV GLLVGGRCAR WPMSLLLWAM TFGRREAHLR DLEWRFVAAF RQKVTEFPVV
AMRLRQYLES SDAEVWLITG SPQRLVEQVY HDSNFIHRLR LIGSRMERRN GGWVLPLRCL
GPEKVVQLEQ RLGSPLKLYS GYSDSKQDNP LLAFCEHRWR VSKTGELQQL E