| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3571 |
|---|
| Symbol | chbR |
|---|
| ID | 5802047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 3791136 |
|---|
| End bp | 3791966 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641341383 |
|---|
| Product | DNA-binding transcriptional regulator ChbR |
|---|
| Protein accession | YP_001607896 |
|---|
| Protein GI | 162419187 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000174355 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCA GATTAGTACG TGAAAGAGAC TTTTTTAACG GTAAAGAATT CCATCTGTTT
ATTTACAACA AAACGGAGAG TGCGACCGGT TTACATCAGC ATGATTATTA TGAATATACG
CTGATATTAA CCGGGATGTG CTACCAGGAA ATTAACGGAA AGCGTGTTTT TTTGGAGCGT
GGGGACTTTA TCTTTATTCC TCTTGGTTCT CATCATCAAA GTTTCTATGA GTTTGGTGCC
ACCCGGATCC TGAATGTCGG GATCAGTAAA GCTTTCTTTG AAGAACATTA TTTCCATTTA
CTGTCTCGGC CTATTGTGGC CTCTCAGGCG TATCGCTTAA GAGGTGATTT TCTTTCCTAT
ATCGAATCGG CGATCTCTGC TCCACACTAC AGAGAAAATG AGCAAACAGA ACTTTTAGAG
CTACTGACCT TTTATGTGAC TAACCGCATC AGTCATTACA AAGAGAGTGA AGTTAACGAC
GATATACCTT CGTGGCTGAA GGCCACAATC GACAAAATGC ATGATAACGC GATGTTTAGT
GAGAAGGCGT TGGTGAATAT GGTCGAGCTT TCTGGCAAAA CCCAAGAATA TCTCACCAGA
GCGACACGGC GCTATTATCA GAAAACGCCC ATGCAGATTA TCAATGAAAT TAGAATAAAT
TTTGCCAAAA CCCAACTTGA AGTGACGAAC TATTTAGTTT CGGATATTGC ATTTGAAGCA
GGCTACAGCG ACACCACGTT ATTCATCAAA AACTTCAAAA AATTAACCTC TTTTACGCCA
GGAAACTATC GCAAGAACTT CTACAGCGCC AGAGAGAGTT TATCCCATTA G
|
|---|
| Protein sequence | MDVRLVRERD FFNGKEFHLF IYNKTESATG LHQHDYYEYT LILTGMCYQE INGKRVFLER
GDFIFIPLGS HHQSFYEFGA TRILNVGISK AFFEEHYFHL LSRPIVASQA YRLRGDFLSY
IESAISAPHY RENEQTELLE LLTFYVTNRI SHYKESEVND DIPSWLKATI DKMHDNAMFS
EKALVNMVEL SGKTQEYLTR ATRRYYQKTP MQIINEIRIN FAKTQLEVTN YLVSDIAFEA
GYSDTTLFIK NFKKLTSFTP GNYRKNFYSA RESLSH
|
|---|
| |