Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3551 |
Symbol | yntE |
ID | 5802027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3774372 |
End bp | 3775037 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341366 |
Product | nickel ABC transporter ATP-binding protein |
Protein accession | YP_001607879 |
Protein GI | 162420688 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00474231 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0402539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGTG TCGAGAATCT GACCATCGTT CAAAGCGGAA AGCGGCTATG GGAGTCGGTA TCCTTCACTT TGGCACCAGG GGAACGATTA GGTATCTCAG CACCCAGTGG CTTTGGTAAA ACGACGCTGG GCCGGGTATT AGCACAATGG CAGTCGGCAA CTGCGGGTCA TATCCTGTTA GAGGGGAAAC CATTAGCTAA AAAAGGATAT TGTCCGGTCC AACTGGTTCC TCAGCACCCA GAGCAAAGTT TTAATCCTTA TCGCACCACC GGTGAGAGCC TACATGATGC CTGGCGGCCC GATGCTGATT GGTTGGCGCG GATGGCGGTT AATCCTGATT GGCTGCAACG CAGGCCGGAT GAATTATCGG GTGGTGAATT GGCCCGCATT GCTTTGTTAC GCGCGCTGGA TCCACGGACG CGTTATTTGA TTGCGGATGA GGTTACCGCA CAATTAGACG CCCGTATTCA GGCTCAAATT TGGCAAGTTT TATTGGAAGA AGCTGAACAC CGTCGATTAG GGCTCATTGT TTTTAGCCAT AATAAGGCAT TATTAGAAAA AGTGTGTTCA CGTATTTGGA TCCCTGAAAG AGAAAGTAAA ACTACAATTT ATCCAACGCC ATTGGTTAAA CCCCATTTGG GGTTAGCAAT GGTAAAAACG GGTTAA
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Protein sequence | MLSVENLTIV QSGKRLWESV SFTLAPGERL GISAPSGFGK TTLGRVLAQW QSATAGHILL EGKPLAKKGY CPVQLVPQHP EQSFNPYRTT GESLHDAWRP DADWLARMAV NPDWLQRRPD ELSGGELARI ALLRALDPRT RYLIADEVTA QLDARIQAQI WQVLLEEAEH RRLGLIVFSH NKALLEKVCS RIWIPERESK TTIYPTPLVK PHLGLAMVKT G
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