Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3550 |
Symbol | yntD |
ID | 5802026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3773573 |
End bp | 3774379 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641341365 |
Product | nickel ABC transporter ATP-binding protein |
Protein accession | YP_001607878 |
Protein GI | 162420168 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0066786 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0642256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGAT TTGACCAATT TGCTATTGAT GTCGCTCATT ATCGTTGGTT GGGCCGGAAA ACCTGGCACC CGTTGTTGAG CCATATTTCT CTGGATGTGA ATCCGGGGGA ATTGGTGGCA TTGGTCGGCG GGAGTGGAGA GGGTAAGAGC TTGTTACTCC AAAGTGTCTT GGGTTTATTG CCGGAGAATA TGCGGTGCCA TGGCGAGATT ATCCTCGATG GTGAGGTACT GTGCGCCCGC GATAAAATTG AGCAGCGGGG TAAAACCTTA TGTTATGTCC CCCAAGGCGT CAGTGCTCTG AACCCACTGA TTAAAGTTGG CTCACAAATC ACCCGAGCAG CGCAACTCAG TGGTGTAAAA CTGCGTTTGG AAAATGTCGC CATGCAGTTG AAAACTTATA ATCTTGCGCC GGGGCTGGTA AATGATTTCC CGCGTCAGCT CTCAGGCGGC ATGGCGAAAC GGGTACTGAC CAGCTGCGCG ACCTTGACCC ATGCCCGCTA TATTCTGGCC GATGAAGTGA CCTCATGGCT AGATGAAGAC CATGCTTGCC AGTTACTGAC GCATCTGCGT GCTTTTTGTC AGCAGGGGCG CGGTATTCTG TGGGTAACCC ATGATTTAGC GTTGGCCGCA CGTTTTGCCG ATAAAATTGC GGTGTTACAT AAAGGTGAGT TGCACGAAAC ATTGAGCGCT GACGAACTGA AAAATAGCGG TGGTAGCCCA TGGTTGCAGT CACTCTGGGC CGCATTACCG GAACAGCAAT TTGTCAGCAA GCCAATCCCA CTGGCTGAGG TGGCCGACTA TGCTTAG
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Protein sequence | MLRFDQFAID VAHYRWLGRK TWHPLLSHIS LDVNPGELVA LVGGSGEGKS LLLQSVLGLL PENMRCHGEI ILDGEVLCAR DKIEQRGKTL CYVPQGVSAL NPLIKVGSQI TRAAQLSGVK LRLENVAMQL KTYNLAPGLV NDFPRQLSGG MAKRVLTSCA TLTHARYILA DEVTSWLDED HACQLLTHLR AFCQQGRGIL WVTHDLALAA RFADKIAVLH KGELHETLSA DELKNSGGSP WLQSLWAALP EQQFVSKPIP LAEVADYA
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