Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3535 |
Symbol | proW |
ID | 5802011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3759107 |
End bp | 3760273 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641341350 |
Product | glycine betaine transporter membrane protein |
Protein accession | YP_001607863 |
Protein GI | 162419458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.872834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0140856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC AAATTCAGGT GAACGAACAA ACAGTCAATA ATCCGTGGGC AACTGATACG GCAACATCAG TCGCTCCCAC GGTTACCGAT AGTGCACCTC AGAGCCTGTC AGCCGCTGCT GACCCATGGG GAGCAAGCAT GGCCGAGGGA AGCAATAGCG TAGGGTCTGC AACGCATGAG GCGGCGTCTC AGGCCGCACA AAATACCGAT TGGTTGAACA GCGCACCTAC CCCAGCACCA GAGCATTTCA GCCTGATGGA CCCGTTCCAG AATACGTGGA TCCCACTGGA CTCGTGGGTT ACCCAAGGTA TTGATTGGGT CGTTCTGCAC TTTCGTCCGC TGTTTCAGGG GATCCGCGTA CCGGTTGATT TTATCCTCAG CGGCTTTCAG GCATTGTTAC TGGGGATGCC CGCACCCGTA GCGATTTTAG TTTTCGCCCT GATAGCCTGG CAGTTTTCCA CGCTCAGTAT GGGCGCGGCA ACCTTGATAT CACTGATTGC CATCGGTGCT ATCGGCGCAT GGTCGCAGGC CATGGTGACC TTGGCACTGG TTCTGACCTC CCTGTTCTTC TGTATTCTGA TTGGGCTCCC CCTCGGAATC TGGCTGGCGC GCAGCAATAA TGCCGCCCGG ATTATTCGGC CCTTACTGGA TGCAATGCAG ACCACACCCG CGTTCGTCTA TCTGGTCCCC ATCGTTATGC TGTTCGGTAT CGGTAACGTC CCCGGTGTCG TGGTGACGAT TATTTTTGCC CTGCCCCCTA TTGTCCGCCT GACCATTCTC GGCATCAAAC AAGTACCGGA AGATCTGATT GAAGCAGCGG AGTCCTTTGG TGCCAACCCG CGTCAGTTGC TGTTCAAAGT ACAGCTACCG CTGGCGATGC CAACCATTAT GGCTGGGGTG AACCAAACGT TGATGCTGGC ATTGTCCATG GTGGTTATCG CTTCAATGAT TGCAGTGGGT GGTTTAGGTC AGATGGTCCT GCGCGGTATT GGCCGTCTGG ATATGGGGCT GGCTGCCGTA GGCGGCGTCG GTATTGTGAT CCTCGCCATT ATTTTGGATC GCTTAACCCA ATCATTAGGT CGTGATCGCC GCAGTAAAGG CACTGGTCGC TGGTATACCA CAGGGCCTGT TGGGTTGCTC ACCAAACCCT TCTGTAACAG CAAATAA
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Protein sequence | MSDQIQVNEQ TVNNPWATDT ATSVAPTVTD SAPQSLSAAA DPWGASMAEG SNSVGSATHE AASQAAQNTD WLNSAPTPAP EHFSLMDPFQ NTWIPLDSWV TQGIDWVVLH FRPLFQGIRV PVDFILSGFQ ALLLGMPAPV AILVFALIAW QFSTLSMGAA TLISLIAIGA IGAWSQAMVT LALVLTSLFF CILIGLPLGI WLARSNNAAR IIRPLLDAMQ TTPAFVYLVP IVMLFGIGNV PGVVVTIIFA LPPIVRLTIL GIKQVPEDLI EAAESFGANP RQLLFKVQLP LAMPTIMAGV NQTLMLALSM VVIASMIAVG GLGQMVLRGI GRLDMGLAAV GGVGIVILAI ILDRLTQSLG RDRRSKGTGR WYTTGPVGLL TKPFCNSK
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