Gene YpAngola_A3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3533 
Symbol 
ID5802009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3757114 
End bp3757881 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content50% 
IMG OID641341348 
Productchitin deacetylase 1 
Protein accessionYP_001607861 
Protein GI162419406 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0673867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGATCA CTATTGCACC GTTCGTTACA CATATGTCGA TGGAGTCACT TTACGAATAT 
GGAACTCGTG CTGGCTTCTG GCGTATCCAT CAGGAGTTTG TTTCTCGGGG GCTGCCTATG
ACGGTCTTTG GTGTCGCCAT GGCATTGGAG CGTAATCCAT TGATTGTCGA AGCGATTAAG
TGTGCGGGTT ATGATGTGGT TTGCCATGGC TGGCGTTGGC TCCATTATCA ACACGTCGAT
GAGCAAACTG AACGTGAGCA TATGCAGCGG GCCATCAAGA TATTACATGA TTTATTCGGC
CAACCCCCTG CAGGCTGGTA TACCGGGCGT GATAGCCCAA ATACCCGGCG GCTGGTGGTG
GAGAATGGTC ACCTTCTGTA CGACAGCGAT TATTATGGCG ATGATTTGCC CTTTTGGTCG
CAGGTCAGGG GAGTTGATGG CAGTACCACC CCACATCTGG TCGTGCCTTA TACACTGGAT
GCCAATGATA TGCGTTTTGC CTCAGCACAG GGATTTAACT CCAGTGAGCA GTTTTATACC
TATTTAAAAG ACAGCTTCGA TGTGTTGTAC GCAGAGGGTG AAACTGCACC TAAAATGATG
TCAGTGGGGA TGCACTGTCG GTTATTAGGG CGCCCTGGAC GTTTCCGGGC TTTGCAGCGC
TTTTTGGATT ATATCCAGCA ACACGAAAGG GTGTGGGTTT GTCGGCGTCA AGAGATTGCG
GAGCATTGGG TTAAACATCA CCCGTTTGAA GGTATCAATG GCCGGTAG
 
Protein sequence
MWITIAPFVT HMSMESLYEY GTRAGFWRIH QEFVSRGLPM TVFGVAMALE RNPLIVEAIK 
CAGYDVVCHG WRWLHYQHVD EQTEREHMQR AIKILHDLFG QPPAGWYTGR DSPNTRRLVV
ENGHLLYDSD YYGDDLPFWS QVRGVDGSTT PHLVVPYTLD ANDMRFASAQ GFNSSEQFYT
YLKDSFDVLY AEGETAPKMM SVGMHCRLLG RPGRFRALQR FLDYIQQHER VWVCRRQEIA
EHWVKHHPFE GINGR