Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3533 |
Symbol | |
ID | 5802009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3757114 |
End bp | 3757881 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341348 |
Product | chitin deacetylase 1 |
Protein accession | YP_001607861 |
Protein GI | 162419406 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0673867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGATCA CTATTGCACC GTTCGTTACA CATATGTCGA TGGAGTCACT TTACGAATAT GGAACTCGTG CTGGCTTCTG GCGTATCCAT CAGGAGTTTG TTTCTCGGGG GCTGCCTATG ACGGTCTTTG GTGTCGCCAT GGCATTGGAG CGTAATCCAT TGATTGTCGA AGCGATTAAG TGTGCGGGTT ATGATGTGGT TTGCCATGGC TGGCGTTGGC TCCATTATCA ACACGTCGAT GAGCAAACTG AACGTGAGCA TATGCAGCGG GCCATCAAGA TATTACATGA TTTATTCGGC CAACCCCCTG CAGGCTGGTA TACCGGGCGT GATAGCCCAA ATACCCGGCG GCTGGTGGTG GAGAATGGTC ACCTTCTGTA CGACAGCGAT TATTATGGCG ATGATTTGCC CTTTTGGTCG CAGGTCAGGG GAGTTGATGG CAGTACCACC CCACATCTGG TCGTGCCTTA TACACTGGAT GCCAATGATA TGCGTTTTGC CTCAGCACAG GGATTTAACT CCAGTGAGCA GTTTTATACC TATTTAAAAG ACAGCTTCGA TGTGTTGTAC GCAGAGGGTG AAACTGCACC TAAAATGATG TCAGTGGGGA TGCACTGTCG GTTATTAGGG CGCCCTGGAC GTTTCCGGGC TTTGCAGCGC TTTTTGGATT ATATCCAGCA ACACGAAAGG GTGTGGGTTT GTCGGCGTCA AGAGATTGCG GAGCATTGGG TTAAACATCA CCCGTTTGAA GGTATCAATG GCCGGTAG
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Protein sequence | MWITIAPFVT HMSMESLYEY GTRAGFWRIH QEFVSRGLPM TVFGVAMALE RNPLIVEAIK CAGYDVVCHG WRWLHYQHVD EQTEREHMQR AIKILHDLFG QPPAGWYTGR DSPNTRRLVV ENGHLLYDSD YYGDDLPFWS QVRGVDGSTT PHLVVPYTLD ANDMRFASAQ GFNSSEQFYT YLKDSFDVLY AEGETAPKMM SVGMHCRLLG RPGRFRALQR FLDYIQQHER VWVCRRQEIA EHWVKHHPFE GINGR
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