Gene YpAngola_A3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3523 
Symbol 
ID5801999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3744950 
End bp3745714 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID641341339 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001607852 
Protein GI162420854 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.271682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATA TTGATTATAA TAGTTTTCGT TCAGTAAAAG GATTCAATCG ACGCGTTCGT 
TTTCTTGTGA TGCATTATAC GGCCTTCAAT TTTAAAGATT CTATCGATGC ACTCACGGGG
CCTTCGGTAA GCGCTCATTA CCTGGTCCCC GATCCGACGG AACAAACTTA TATTGATGCC
GGTTTCAAGG ATATGCGTAT TTTTAATCTT GTTGATGAAA ATGAGCGTGC CTGGCATGCA
GGAGTGAGTT ATTGGGATGG TCGGAATAAT CTTAATGATA CCGCTATAGG GATTGAGACT
GTTAATCTTG CTACTGATAA CGATGGTGTA TTCACTTTCC CGCCCTACAA TGTTACCCAG
ATAGCGGCAA TTAAAGCGTT GGCATCAAAT ATTCTTTATC GTTTCCCTGA TATTACGCCA
GTCAATGTCG TTGGCCACAG TGATATTGCG CCTGGTCGAA AAAGTGATCC GGGTGCTGCC
TTTCCGTGGA AGGCACTTTA TGACGCAGGT ATTGGTGCCT GGTATGACGA TGAAACTAAG
CAACGGTATC TGGATCAGTT TCTTTGTAGC CTGCCATCAA AAAACGATAT TATTTCAAAA
TTGAAACGAT ATGGTTATGA CACGTCTGGC GCAGTCAGTG AGGTGGGATA TAATCAATTA
ATCCGTGCTT TCCAACTTCA TTTTCGGCCA TGTAATTATG ATGGTATACC GGATGCAGAA
ACGGTTGCGA TCCTCTATGC ATTAGTCGAT AAATATAAAC CATAA
 
Protein sequence
MYNIDYNSFR SVKGFNRRVR FLVMHYTAFN FKDSIDALTG PSVSAHYLVP DPTEQTYIDA 
GFKDMRIFNL VDENERAWHA GVSYWDGRNN LNDTAIGIET VNLATDNDGV FTFPPYNVTQ
IAAIKALASN ILYRFPDITP VNVVGHSDIA PGRKSDPGAA FPWKALYDAG IGAWYDDETK
QRYLDQFLCS LPSKNDIISK LKRYGYDTSG AVSEVGYNQL IRAFQLHFRP CNYDGIPDAE
TVAILYALVD KYKP