Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3523 |
Symbol | |
ID | 5801999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3744950 |
End bp | 3745714 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641341339 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001607852 |
Protein GI | 162420854 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.271682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAATA TTGATTATAA TAGTTTTCGT TCAGTAAAAG GATTCAATCG ACGCGTTCGT TTTCTTGTGA TGCATTATAC GGCCTTCAAT TTTAAAGATT CTATCGATGC ACTCACGGGG CCTTCGGTAA GCGCTCATTA CCTGGTCCCC GATCCGACGG AACAAACTTA TATTGATGCC GGTTTCAAGG ATATGCGTAT TTTTAATCTT GTTGATGAAA ATGAGCGTGC CTGGCATGCA GGAGTGAGTT ATTGGGATGG TCGGAATAAT CTTAATGATA CCGCTATAGG GATTGAGACT GTTAATCTTG CTACTGATAA CGATGGTGTA TTCACTTTCC CGCCCTACAA TGTTACCCAG ATAGCGGCAA TTAAAGCGTT GGCATCAAAT ATTCTTTATC GTTTCCCTGA TATTACGCCA GTCAATGTCG TTGGCCACAG TGATATTGCG CCTGGTCGAA AAAGTGATCC GGGTGCTGCC TTTCCGTGGA AGGCACTTTA TGACGCAGGT ATTGGTGCCT GGTATGACGA TGAAACTAAG CAACGGTATC TGGATCAGTT TCTTTGTAGC CTGCCATCAA AAAACGATAT TATTTCAAAA TTGAAACGAT ATGGTTATGA CACGTCTGGC GCAGTCAGTG AGGTGGGATA TAATCAATTA ATCCGTGCTT TCCAACTTCA TTTTCGGCCA TGTAATTATG ATGGTATACC GGATGCAGAA ACGGTTGCGA TCCTCTATGC ATTAGTCGAT AAATATAAAC CATAA
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Protein sequence | MYNIDYNSFR SVKGFNRRVR FLVMHYTAFN FKDSIDALTG PSVSAHYLVP DPTEQTYIDA GFKDMRIFNL VDENERAWHA GVSYWDGRNN LNDTAIGIET VNLATDNDGV FTFPPYNVTQ IAAIKALASN ILYRFPDITP VNVVGHSDIA PGRKSDPGAA FPWKALYDAG IGAWYDDETK QRYLDQFLCS LPSKNDIISK LKRYGYDTSG AVSEVGYNQL IRAFQLHFRP CNYDGIPDAE TVAILYALVD KYKP
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