Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3512 |
Symbol | |
ID | 5801988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3728306 |
End bp | 3728983 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641341329 |
Product | putative DNA-binding protein |
Protein accession | YP_001607842 |
Protein GI | 162418894 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.651472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.122215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGTAACA TCATGAGAGA TATATTAAAT AAAGCATTTA CTGATGATGA TCGGAGATTA TTACAGTCTT ATATTCCCTT CATAGAGTGC TTGGGACAGT TTTTTGGTGA GTACTGTGAA ATTGTACTGC ACAGTTTTGA AGATCTTCAT CGTTCCGTGA TCCACATTGT GAATGGGCAT GTTACTGGCA GAGAGTTAGG TGCGCCGGTC ACCAATATAG CCTTGGAAAA ACTGACAGAA TTCAAATCAT CAAAAGAGAT GTGGGATGTT TATTTCAGCA ATAAAGATAC GCGTCCTTTT AAGTCTTCAT CCACTCTGAT AGTTAACAAA CAGGGCGATC CAATAGGAAT GATATGCATG AATATGGCGA TGGATATGCC AATGAATGCT TTTATCGATA TATTCATGAA AGCCAATAAT AGTTGTAGAA ATGAGAGTTT TACACAGGAT GTCAATAACC TGGTCCAAAG CCACCTTGAA CCGGTTAAGA GTATGGTTTA TGCGAATAAA GACATCCCTA GTAAGAAAAA AAATTTCGAA ATAATCAAAG AATTAAATGA AACGGGTTTA TTTGAACTCC CCGTAACAAA TAAAATTGTC TCCGCAAGTC TGGGGATTAG TCCGGTGACC ATTTATAAAC ATTTAAGAAC GCTAAATGCA CAAAAAGTCA GTGAGTGA
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Protein sequence | MGNIMRDILN KAFTDDDRRL LQSYIPFIEC LGQFFGEYCE IVLHSFEDLH RSVIHIVNGH VTGRELGAPV TNIALEKLTE FKSSKEMWDV YFSNKDTRPF KSSSTLIVNK QGDPIGMICM NMAMDMPMNA FIDIFMKANN SCRNESFTQD VNNLVQSHLE PVKSMVYANK DIPSKKKNFE IIKELNETGL FELPVTNKIV SASLGISPVT IYKHLRTLNA QKVSE
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