Gene YpAngola_A3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3512 
Symbol 
ID5801988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3728306 
End bp3728983 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID641341329 
Productputative DNA-binding protein 
Protein accessionYP_001607842 
Protein GI162418894 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.651472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.122215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTAACA TCATGAGAGA TATATTAAAT AAAGCATTTA CTGATGATGA TCGGAGATTA 
TTACAGTCTT ATATTCCCTT CATAGAGTGC TTGGGACAGT TTTTTGGTGA GTACTGTGAA
ATTGTACTGC ACAGTTTTGA AGATCTTCAT CGTTCCGTGA TCCACATTGT GAATGGGCAT
GTTACTGGCA GAGAGTTAGG TGCGCCGGTC ACCAATATAG CCTTGGAAAA ACTGACAGAA
TTCAAATCAT CAAAAGAGAT GTGGGATGTT TATTTCAGCA ATAAAGATAC GCGTCCTTTT
AAGTCTTCAT CCACTCTGAT AGTTAACAAA CAGGGCGATC CAATAGGAAT GATATGCATG
AATATGGCGA TGGATATGCC AATGAATGCT TTTATCGATA TATTCATGAA AGCCAATAAT
AGTTGTAGAA ATGAGAGTTT TACACAGGAT GTCAATAACC TGGTCCAAAG CCACCTTGAA
CCGGTTAAGA GTATGGTTTA TGCGAATAAA GACATCCCTA GTAAGAAAAA AAATTTCGAA
ATAATCAAAG AATTAAATGA AACGGGTTTA TTTGAACTCC CCGTAACAAA TAAAATTGTC
TCCGCAAGTC TGGGGATTAG TCCGGTGACC ATTTATAAAC ATTTAAGAAC GCTAAATGCA
CAAAAAGTCA GTGAGTGA
 
Protein sequence
MGNIMRDILN KAFTDDDRRL LQSYIPFIEC LGQFFGEYCE IVLHSFEDLH RSVIHIVNGH 
VTGRELGAPV TNIALEKLTE FKSSKEMWDV YFSNKDTRPF KSSSTLIVNK QGDPIGMICM
NMAMDMPMNA FIDIFMKANN SCRNESFTQD VNNLVQSHLE PVKSMVYANK DIPSKKKNFE
IIKELNETGL FELPVTNKIV SASLGISPVT IYKHLRTLNA QKVSE