| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3492 |
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| Symbol | holB |
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| ID | 5801968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3707762 |
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| End bp | 3708769 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641341309 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001607822 |
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| Protein GI | 162420936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000181629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0164304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGT ATCCGTGGCT TAACGCCCCT TACCGCCAAC TGGTTGGGCA GCACAGTACC
GGGCGCGGGC ACCATGCATT ACTGCTGCAT TCATTACCCG GTAATGGCGA AGACGCATTG
ATTTATGCGC TGAGTCGTTG GCTAATGTGT CAGCAGCGGC AAGGTGAGAA GAGTTGTGGT
GAATGCCATA GCTGCCGCTT GATGTTGGCA GGCAACCACC CCGATTGGTA TGTACTGACA
CCGGAAAAAG GCAAAAGCAG TATCGGGGTT GAGTTGGTTC GTCAATTGAT TGATAAACTG
TATTCCCATG CTCAACAAGG CGGTGCAAAG GTGGTGTGGT TGCCACATGC CGAAGTGTTG
ACCGATGCCG CTGCTAATGC CCTGCTAAAA ACGCTGGAAG AGCCTCCAGA GAAGACCTAT
TTTCTGTTGG ATTGCCACCA ACCCGCCAGC TTGCTGGCTA CACTGCGTAG CCGCTGTTTT
TATTGGTATC TGGCTTGCCC GGATACGGCT ATTTGTCTGC AATGGCGTAA GCGGCAGATC
CCTGTGGAGC CCGTTGCGAT GTTGGCGGCC CTGAAATTGA GTGAAGGCGC ACCGCTGGCG
GCTGAGCGGT TGCTCCAACC AGAGCGTTGG AGTATCCGCA GCGCTTTGTG TAGCGGGCTA
CGCGAGGCAC TGAACCGCTC AGACTTGCTG TCGTTGTTAC CACAACTTAA CCATGATGAT
GCTGCTGAAC GTCTGCAATG GCTCTCTTCA CTGCTCTTGG ATGCGTTGAA GTGGCAGCAA
GGGGCAGGGG AGTTTGCGGT TAATCAGGAT CAATTACCCT TAGTGCAACA GTTGGCACAC
ATCGCGGCGA CGCCAGTATT ACTTCAGTTG GCTAAGCAAC TGGCTCATTG CCGCCATCAA
TTATTATCTG TGGTAGGTGT TAATCGTGAA TTGTTACTCA CTGAGCAACT GCTTAGCTGG
GAAACAGCAC TGTCCACGGG TACTTATTCC ACCTTACCTT CGTTGTAA
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| Protein sequence | MNWYPWLNAP YRQLVGQHST GRGHHALLLH SLPGNGEDAL IYALSRWLMC QQRQGEKSCG
ECHSCRLMLA GNHPDWYVLT PEKGKSSIGV ELVRQLIDKL YSHAQQGGAK VVWLPHAEVL
TDAAANALLK TLEEPPEKTY FLLDCHQPAS LLATLRSRCF YWYLACPDTA ICLQWRKRQI
PVEPVAMLAA LKLSEGAPLA AERLLQPERW SIRSALCSGL REALNRSDLL SLLPQLNHDD
AAERLQWLSS LLLDALKWQQ GAGEFAVNQD QLPLVQQLAH IAATPVLLQL AKQLAHCRHQ
LLSVVGVNRE LLLTEQLLSW ETALSTGTYS TLPSL
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