Gene YpAngola_A3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3455 
Symbol 
ID5801932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3670384 
End bp3671583 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content53% 
IMG OID641341274 
Productmajor facilitator transporter 
Protein accessionYP_001607791 
Protein GI162419333 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA CTGACACTCC TGGTTTAAGC CCGGCACTGA TCGTATTGAT GTCGGTAGCC 
ACGGGGCTGG CCGTTGCCAG TAACTACTAC GCCCAGCCCT TGTTGGAAAC TATCGCCACA
AACTTTAACC TCTCTGTCAA TCAGGCCGGT TTTATCGTCA CCGCCGCCCA ATTGGGCTAT
GCCGTAGGAC TGATGTTCTT AGTCCCACTG GGCGATATGT TTGAACGCCG TGGGCTGATT
GTTGGCATGA CCTTACTGGC AGCAGGCGGC ATGCTGATTA CCGCGATGTC GCAAAATCTG
ACGATGATGA TTATCGGGAC CGCCCTCACC GGCTTGTTCT CTGTGGTCGC ACAATTGTTG
GTCCCCTTAG CGGCGACACT GGCAGCACCA GAAAAACGCG GTAAAGTGGT CGGTATCATT
ATGAGCGGCC TGTTGTTGGG TATTTTACTG GCTCGGACCG TCGCTGGCGC ACTGGCAACC
CTCGGCGGCT GGCGCACCAT TTATTGGGTT GCCAGTGCCT TGATGTTTAT CATGGCACTG
GTCCTTTGGC GCTGCCTGCC ACGCTATAAA CAACATACCG GTTTAAATTA TGGTCAGTTG
CTCGGTTCAA TTTTCGCCCT GTTTATTCAC ACCCCCGTAC TGCGTACCCG CGCTTTACTC
GGGGCATTAT CATTCGCCAA TTTCAGTGTG CTATGGACAT CAATGGCCTT CCTGCTGGCC
GCGCCACCAT TCGGTTACTC TGAAGCCACT ATTGGGCTAT TTGGTTTAGT GGGGGCCGCT
GGCGCATTAA TGGCGACCAA AGCGGGTCAA TTGGCCGATA AAGGTAAAGC ACGTGTCACC
ACCAGCGCCG GATTAGTTTT ACTGTTGCTA TCCTGGTTGC CCATTGCCTT CGGCCAACAC
TCAATCATCG CACTGATTAT TGGGATTATC GTACTGGATT TAGCCGTACA GGCTGTGCAC
GTGACCAACC AGAGCGTGAT GTACCGCATG ATGCCAGAAG CAAGAAACCG CCTAACCGCA
GGCTATATGA CGTCTTACTT TATCGGTGGA GCACTGGGGT CGCTGATTTC AGCCGCCGCC
TATCAACATG CTGGCTGGTA TGGCGTCTCC ACCGCAGGGT TGGTCCTGTG CCTGTTGAAT
ATAGTGACCT GGCTTGTGGG TAAACGAAGT GATCAACCCG CGAATCAAAC CGTAGAATAA
 
Protein sequence
MQKTDTPGLS PALIVLMSVA TGLAVASNYY AQPLLETIAT NFNLSVNQAG FIVTAAQLGY 
AVGLMFLVPL GDMFERRGLI VGMTLLAAGG MLITAMSQNL TMMIIGTALT GLFSVVAQLL
VPLAATLAAP EKRGKVVGII MSGLLLGILL ARTVAGALAT LGGWRTIYWV ASALMFIMAL
VLWRCLPRYK QHTGLNYGQL LGSIFALFIH TPVLRTRALL GALSFANFSV LWTSMAFLLA
APPFGYSEAT IGLFGLVGAA GALMATKAGQ LADKGKARVT TSAGLVLLLL SWLPIAFGQH
SIIALIIGII VLDLAVQAVH VTNQSVMYRM MPEARNRLTA GYMTSYFIGG ALGSLISAAA
YQHAGWYGVS TAGLVLCLLN IVTWLVGKRS DQPANQTVE