Gene YpAngola_A3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3449 
Symbol 
ID5801926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3665795 
End bp3666583 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID641341268 
Productamino acid ABC transporter periplasmic amino acid-binding protein 
Protein accessionYP_001607785 
Protein GI162419996 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA AAAAGCGGAT GTTGTGGCTG TGGGCAGTAC TGGTATTGGT TCAGGCCCCT 
GCGGTATTAG CGGATCAATT AGAGAAAATA CAACAGCGTG GAGTCTTGCG TGTGGCGGTA
CCTCAAGATT TTCCGCCTTT TGGTTCGGTA GGAACTGATC TTCAGCCACA GGGCTATGAT
ATCGATATGG CTCAGTACCT GGCCGATAAA ATGAAACTAA AGTTGCAACT GGTGTCAGTG
ACCAGTGCCA ATCGGGTGCC TTATCTGCAA ACCGATAAAG TGGATTTGGT GATTTCCAGT
CTGGGTAAAA ATCCGGAGCG GGAAAAAGCC ATCGCCTTTA GCCGTGCTTA TGAGCCGTTT
TTCCTCGGCG TATTTGGGGC TAAAGATGAT GAACTGAAGC AACCGGAACA ACTGGCGGGT
AAAACCATTG GTGTCACTCG TGGGGCGGTG GAAGACATGG TATTAAGCGA GATCGCGCCG
AAAGCGGCTC AGATCAGACG CTATGAGGAT AACAACACCA CGCTGTCGGC CTATCTATCC
GGTCAGGTTA ATTATCTGGC AACCGGCAAT CTGGTTATCA GCGCCTTGGC CCGCCAGAAT
CCTAAGCAGG CACCCGTCGC AAAATTTATG CTGAAAGATT CACCGTGTTA TATCGGCCTG
CGTCAGGGAG AACCGGCACT GAAAGCCAAA GTGGACGCCT TGATTGGTGA CGCGTTGCAG
GACAATACGC TGAATGGCTT ATCGGAGAAA TGGTTGAAAG CGCCGTTACC TGCTGATCTT
GGTGCATAA
 
Protein sequence
MNIKKRMLWL WAVLVLVQAP AVLADQLEKI QQRGVLRVAV PQDFPPFGSV GTDLQPQGYD 
IDMAQYLADK MKLKLQLVSV TSANRVPYLQ TDKVDLVISS LGKNPEREKA IAFSRAYEPF
FLGVFGAKDD ELKQPEQLAG KTIGVTRGAV EDMVLSEIAP KAAQIRRYED NNTTLSAYLS
GQVNYLATGN LVISALARQN PKQAPVAKFM LKDSPCYIGL RQGEPALKAK VDALIGDALQ
DNTLNGLSEK WLKAPLPADL GA