Gene YpAngola_A3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3409 
Symbol 
ID5801885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3625470 
End bp3626177 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID641341228 
Producthypothetical protein 
Protein accessionYP_001607746 
Protein GI162419087 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0939148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAT TCTCTTTTAA TCAGATCGGC GTGATCCGTT CACCGTATAA AGAAAAGTTT 
GCGGTACCAC GGCAACCCGG TTTGGTTGAG GATGGTGGTG GCGAATTACA GTTGCTGGCA
CCTTACAACC AACCAGAAAG CGTACGCGGC TTATCTGACT TCAGCCATTT ATGGGTGATA
TTCGTTTTCC ATCAGACGAT GGAGGGTGGC TGGCGTCCAA CTGTTCGCCC TCCCCGTCTG
GGGGGAAATA CACGAATGGG CGTATTTGCG ACCCGTTCAA CTTTTCGTCC AAACCCGATA
GGCATGTCGC TGATTGAGTT GAAAGGCGTT CGTTGCCAAA ACGGTGAGGT GATTCTGGCA
TTGGGCAGCC TGGATTTAGT TGATGGCACG CCTGTTATTG ATATTAAACC TTATCTGCCT
TTCGCTGAGA GCCAACCTCA GGCGCGCGCT GGTTTTGCGC AATCTGCACC AGATACAGAG
ATGCAAGTTT GCTTTTCTCC CGCCGCCGAG CAACAGTTAG CTCACCACCA GCAGCGTTAT
CCACATCTTC GCCGTTTTAT CAGCCAAGTT TTAGCACAAG ATCCACGCCC AGCTTACCGT
AAAGACGATA ATGAAAGCCG TGAATATGCC GTTTTATTAC TGGAATTTAA TGTGCGCTGG
CGGGTTATTG GCCAGCAAAC AGAAGTGTTA TCACTCGACC CACGCTAA
 
Protein sequence
MSTFSFNQIG VIRSPYKEKF AVPRQPGLVE DGGGELQLLA PYNQPESVRG LSDFSHLWVI 
FVFHQTMEGG WRPTVRPPRL GGNTRMGVFA TRSTFRPNPI GMSLIELKGV RCQNGEVILA
LGSLDLVDGT PVIDIKPYLP FAESQPQARA GFAQSAPDTE MQVCFSPAAE QQLAHHQQRY
PHLRRFISQV LAQDPRPAYR KDDNESREYA VLLLEFNVRW RVIGQQTEVL SLDPR