| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3390 |
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| Symbol | |
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| ID | 5801868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3608723 |
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| End bp | 3609403 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641341211 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001607733 |
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| Protein GI | 162419700 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.47762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAG CGAAAAGAAC AGCATTGGTT ATCGGTGCTT CACGGGGGTT AGGGCTAGGG
TTGGTTGATG AGCTTAGTCG CCGCGGATGG TCTGTCACCG CGACCACACG TGGCGCGGCT
CAAGATACGT CAGCACATGC CGCCCATTGG TTAAAATTAG ATATTAATCA GCCAGAAAGC
ATTAAGCAGT TTTTACCACA AGTACAGGGG CAGCGATTCG ACCTGATATT TGTTAACGCC
GGAATCTCTG GGCCAGCACA CCAATCTGCG ATCGATGCCA CACCCGATGA AATCCAGGAA
CTGTTCCAGA CTAACGCCAT CTCGCCTATC CGAATTGCTC AACATTTGCT GGCACAACGC
AATCCAACCC AGAGCGTATT GGCGTTTATG TCTTCCCAGT TAGGCAGTAT TGAACGCAAT
GTTTCTGGGC ATAAACCGTT GTATTCAGCC AGTAAAGCCG CATTGAATAT GATGACGCGT
AATCTGGTGG CTGAAGTTGC AGATCCGACC TTGACGGTAT TATCGATTCA TCCCGGTTGG
GTGAAAACGG ATATGGGCGG TGATGCGGCA CCGTTGACGA TTACTACCAG TGTGAAGGGC
GTGGTCGATC AAATCGAACA GGCTTCAGGG AAAGGGGGCC ACGGATTTAT TGACTATCAG
GGGCATTCAT TACCGTGGTA A
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| Protein sequence | MGTAKRTALV IGASRGLGLG LVDELSRRGW SVTATTRGAA QDTSAHAAHW LKLDINQPES
IKQFLPQVQG QRFDLIFVNA GISGPAHQSA IDATPDEIQE LFQTNAISPI RIAQHLLAQR
NPTQSVLAFM SSQLGSIERN VSGHKPLYSA SKAALNMMTR NLVAEVADPT LTVLSIHPGW
VKTDMGGDAA PLTITTSVKG VVDQIEQASG KGGHGFIDYQ GHSLPW
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