Gene YpAngola_A3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3377 
SymbolagaR 
ID5801854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3594130 
End bp3594906 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content48% 
IMG OID641341198 
ProductDeoR-family regulatory protein 
Protein accessionYP_001607720 
Protein GI162419234 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.365901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCGG CAATCGAAAG GCGCATGGAA ATCTTCAATA TAGTAACCCA GCAAGGGAAA 
GCTCGTGTCG AAGATCTAGC CGAAAGATTC AATGTCTCAA GTGTCACCAT TCGTAGTGAC
CTGAGTTTTT TAGAGAAAAA CGGGTACATC GTCAGATCGC ACGGTTCGGC TATTCCGAAC
ACCGGCGTTA TCGCCGAGCT GACTGTCCAT GAAAAGCGGC GCCGTAATTC CGGCGTGAAA
TCGCTGATTG GTCAGGCGGC GGCGAAGCTG ATTAACAGTG GTGACACCGT CATTCTGGAT
TCAGGGACAA CCACACGGGA AATTGCGGCC AACTTGAGGT CGGTAGAGAA CGTAGTGGTT
ATGACGAATG GTCTTGATGT GGCTATGGAG TTAGCATCCG CTCCCGGCGT GGAAGTCCTC
ATCTCCGGTG GTGTGTTGCG TAAGAGTGCG ATGTCTTTTT CTGGTTCTCA AGCCGAAGCC
AGCCTGAAAA ACTTTCGTTT TGACAAAGTT TTTCTGGGTG TTGATGGTTT TGACTTGCGA
GTTGGTATCA CCACATATAA TGAGCAGGAA GCGAGTCTTA ACCGCCTAAT GTGTGACATC
TCGGAACAAA TTATTGCCGT TGCTGATTCG ACCAAGTTTG GGAAACGCAG CTGCCACATG
ATTCGAGAGT TTGGTGATAT CGATATTTTG GTGACGGATT CGGATATTCC TGAAGAGTAT
GTGCAGCGAC TACGGGATAT GCGAATTGAA GTGATCATAG CTGAAAAAGA GAAATAA
 
Protein sequence
MKAAIERRME IFNIVTQQGK ARVEDLAERF NVSSVTIRSD LSFLEKNGYI VRSHGSAIPN 
TGVIAELTVH EKRRRNSGVK SLIGQAAAKL INSGDTVILD SGTTTREIAA NLRSVENVVV
MTNGLDVAME LASAPGVEVL ISGGVLRKSA MSFSGSQAEA SLKNFRFDKV FLGVDGFDLR
VGITTYNEQE ASLNRLMCDI SEQIIAVADS TKFGKRSCHM IREFGDIDIL VTDSDIPEEY
VQRLRDMRIE VIIAEKEK