Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3377 |
Symbol | agaR |
ID | 5801854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3594130 |
End bp | 3594906 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341198 |
Product | DeoR-family regulatory protein |
Protein accession | YP_001607720 |
Protein GI | 162419234 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.365901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCGG CAATCGAAAG GCGCATGGAA ATCTTCAATA TAGTAACCCA GCAAGGGAAA GCTCGTGTCG AAGATCTAGC CGAAAGATTC AATGTCTCAA GTGTCACCAT TCGTAGTGAC CTGAGTTTTT TAGAGAAAAA CGGGTACATC GTCAGATCGC ACGGTTCGGC TATTCCGAAC ACCGGCGTTA TCGCCGAGCT GACTGTCCAT GAAAAGCGGC GCCGTAATTC CGGCGTGAAA TCGCTGATTG GTCAGGCGGC GGCGAAGCTG ATTAACAGTG GTGACACCGT CATTCTGGAT TCAGGGACAA CCACACGGGA AATTGCGGCC AACTTGAGGT CGGTAGAGAA CGTAGTGGTT ATGACGAATG GTCTTGATGT GGCTATGGAG TTAGCATCCG CTCCCGGCGT GGAAGTCCTC ATCTCCGGTG GTGTGTTGCG TAAGAGTGCG ATGTCTTTTT CTGGTTCTCA AGCCGAAGCC AGCCTGAAAA ACTTTCGTTT TGACAAAGTT TTTCTGGGTG TTGATGGTTT TGACTTGCGA GTTGGTATCA CCACATATAA TGAGCAGGAA GCGAGTCTTA ACCGCCTAAT GTGTGACATC TCGGAACAAA TTATTGCCGT TGCTGATTCG ACCAAGTTTG GGAAACGCAG CTGCCACATG ATTCGAGAGT TTGGTGATAT CGATATTTTG GTGACGGATT CGGATATTCC TGAAGAGTAT GTGCAGCGAC TACGGGATAT GCGAATTGAA GTGATCATAG CTGAAAAAGA GAAATAA
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Protein sequence | MKAAIERRME IFNIVTQQGK ARVEDLAERF NVSSVTIRSD LSFLEKNGYI VRSHGSAIPN TGVIAELTVH EKRRRNSGVK SLIGQAAAKL INSGDTVILD SGTTTREIAA NLRSVENVVV MTNGLDVAME LASAPGVEVL ISGGVLRKSA MSFSGSQAEA SLKNFRFDKV FLGVDGFDLR VGITTYNEQE ASLNRLMCDI SEQIIAVADS TKFGKRSCHM IREFGDIDIL VTDSDIPEEY VQRLRDMRIE VIIAEKEK
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