| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3368 |
|---|
| Symbol | |
|---|
| ID | 5801845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3585669 |
|---|
| End bp | 3586727 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641341189 |
|---|
| Product | glycosy hydrolase family protein |
|---|
| Protein accession | YP_001607711 |
|---|
| Protein GI | 162421163 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.65377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA TGACACAGCA GACGCGTACT CAACAGGCGC GTGAAACAAT GAAGCGGGTA
TATCGCTATC AGGCAGCAAA CCAAACACGT AGTGTGATCC GTCGGAGTGG CAAGACGCGT
TTTATTAAAG ACACAGACTG GGAGCGTGGT GTGTTCTGGT CATGCGTTGC CGCCGCTTGG
CTGGCAACCG ATGACGCCGA GTATCTGGAG GGCGTCATGA ATTACACGCT GCATACCGGG
TTCCGCCCTG GACCCAATCT GCGCTTTGCC GATGACCTGA TTTGCTGTCA GGCCTATCTG
GATGTCTGGC CGCAGATAGC CGTACCGGAA GCATTAGAGC CAACCATCAA AGCCGTCTCT
GCCATGGTGG ACGAACCAAA GCCGGGGCGT GAAGATTGGT GGTGGTGTGA CTCATTGTTT
ATGGCCCCCG CCACCTTTGC AGCATTGAGC CAACGTACCG GTGACGCCCG TTATCTGGCT
TATATGGACA CCGCATTCTG GGATGCAGTT GATTATCTGC GCGACCCTGA CAGCGGTTTG
TTCTACCGCG ATCATCGCTA TATTCCTGAC GGTACCGGCA CTGAACTGCG TGAAGAAAAT
GGCGAGAAAG TGTTCTGGAG CCGGGGTATT GGCTGGGTAC TGGCTGCCAT CCCACGCCTG
CTCGCGCGGA TGCCAGAAGA TTATACCGGT CGTCAGCGTT ATCTCGATCT GTTTACTGAT
CTGGCAGATA ACGTGATCCG TTACCAGCAA GCGGATGGTT TATGGCGTAC CAGTCTGCTC
GATCCTCAGC GGTTTCCTGC CCCAGAGAGC AGTGCAACAG CGCTGTTTTG TTACGGGCTG
AGCTGGGGAA TTAACCAAGG TATTCTGGCA CCAGAAACCT ATCTGCCTGT GGTGGAAAAA
GCCTGGGATG CCCTGCAAGG CTGTATCCAC GATAACGGCA TGATGGGTTG GGTTCAGCTA
CCGGCCTTTA ATCCGCGTGA TGTGAAATTT GAGCACAACA TGGATTATGG CGCGGGGGCT
TATTTATTGG CCGCGTCGGA AATGTTACGT CTGGCCTAA
|
|---|
| Protein sequence | MSNMTQQTRT QQARETMKRV YRYQAANQTR SVIRRSGKTR FIKDTDWERG VFWSCVAAAW
LATDDAEYLE GVMNYTLHTG FRPGPNLRFA DDLICCQAYL DVWPQIAVPE ALEPTIKAVS
AMVDEPKPGR EDWWWCDSLF MAPATFAALS QRTGDARYLA YMDTAFWDAV DYLRDPDSGL
FYRDHRYIPD GTGTELREEN GEKVFWSRGI GWVLAAIPRL LARMPEDYTG RQRYLDLFTD
LADNVIRYQQ ADGLWRTSLL DPQRFPAPES SATALFCYGL SWGINQGILA PETYLPVVEK
AWDALQGCIH DNGMMGWVQL PAFNPRDVKF EHNMDYGAGA YLLAASEMLR LA
|
|---|
| |