Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3250 |
Symbol | |
ID | 5801728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3451924 |
End bp | 3453084 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641341080 |
Product | major facilitator transporter |
Protein accession | YP_001607602 |
Protein GI | 162420198 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000228404 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGTTG CACTACTGGC GTTGGCGCTG TGTGCTTTTG CTATTGGTAC TACTGAATTT GTCATTATGG GGTTATTGCC CCAGGTAGCG GGTGATTTGC ACATATCGAT TCCAACTGCG GGCTGGTTGA TCAGTGGTTA TGCGCTAGGT GTGGCAATTG GCGCGCCCAT CATGGCAGTG CTGACCGCGA AATTACCGCG CAAGAAGACA CTGTTACTGT TAATGGTGAT TTTTATCATC GGTAACCTGA TGTGTGCCTT GGCATACAGT TATGACTTCC TGATGTTCGC GCGAGTGATC ACCGCGTTGT GTCATGGGGC CTTTTTTGGT ATCGGCGCGG TGGTCGCCGC AAATCTGGTG GCACCAAACC GGCGGGCCTC GGCGGTGGCA CTGATGTTTA CGGGGCTGAC GCTGGCGAAT GTATTGGGTG TCCCACTGGG GACCGCTCTA GGTCAGGCTT TTGGCTGGCG TTCGACATTT TGGGTGGTAT CGGTCATCGG TTTGTTCTCG TTGGCAGCCC TGTATAGCAA GTTGCCCTCC TCCAGCGAGG AAGCACCGAC TGAGCTTCGT AAGGAGATTG CCGCTTTGCG TGGCGGTGGA ATTTGGCTCT CCTTACTGAT GACCGTATTT TTTGCCGCAG CCATGTTTGC GCTCTTTACC TACATCGCCC CCATTTTGAC GGAGGTCACA CAGGTTTCTG AGCATGGCGT CAGTTGGACG TTACTGCTAA TGGGGGTTGG CTTGACGCTC GGTAATATCG TCGGGGGCAG GCTAGCTGAC TGGCGTTTAT CGGTCAGTTT AACCATGACA TTCTTGTTGA TCGCGGTATT TTCTGCCCTG TTTAGTTGGA CCAGTTATTC ACTGTTGGCG GCGGAAGTGA CACTGTTTTT GTGGTCAGCC GCCGCATTTT CTGCAGTGCC TGCGTTGCAA ATTAATGTCG TCGCTTATGG CAAGAAAGCC CCTAATCTGG TGTCAACGCT GAATATTGCG GCCTTTAATG TGGGTAACGC CTTAGGGGCG TGGGTCGGGG GGGTTGTGAT TGCCAAAGGG CTTGGTTTGA CGGCGGTGCC GCTGGCCGCC GCGGCACTGG CGGTCATGGG GTTGTTGCTG TGTCTGTTTA CCTTTTCCCG CGCGCGTACT ATTGGGAATA AAATGGCTTA G
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Protein sequence | MPVALLALAL CAFAIGTTEF VIMGLLPQVA GDLHISIPTA GWLISGYALG VAIGAPIMAV LTAKLPRKKT LLLLMVIFII GNLMCALAYS YDFLMFARVI TALCHGAFFG IGAVVAANLV APNRRASAVA LMFTGLTLAN VLGVPLGTAL GQAFGWRSTF WVVSVIGLFS LAALYSKLPS SSEEAPTELR KEIAALRGGG IWLSLLMTVF FAAAMFALFT YIAPILTEVT QVSEHGVSWT LLLMGVGLTL GNIVGGRLAD WRLSVSLTMT FLLIAVFSAL FSWTSYSLLA AEVTLFLWSA AAFSAVPALQ INVVAYGKKA PNLVSTLNIA AFNVGNALGA WVGGVVIAKG LGLTAVPLAA AALAVMGLLL CLFTFSRART IGNKMA
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