Gene YpAngola_A3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3245 
Symbol 
ID5801721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3442103 
End bp3443323 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content53% 
IMG OID641341073 
Productlysophospholipid transporter LplT 
Protein accessionYP_001607596 
Protein GI162421079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0158938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00481427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCAGG ACGTATTAGC AGATAAGCCT TTGTTATCTC GGAGCATGGT CGCGGTACTC 
TGTGCTCAGT TTTTCTCCGC TTTCGGGGAT AATGCCCTGC TGTTTGCCAC ATTGGCATTG
ATTAAACAGC AACTTTATCC CGACTGGAGC CAACCTATTT TACAGATGGC ATTTGTCGCG
ACTTATATTG TTCTGGCACC GTTCGTCGGG CAGATTGCCG ATGGTTTCGC CAAAGGCCGG
GTAATGATGG TGGCTAATGG TTTGAAATTG GCTGGCGCTC TGGTTATCTG TTTTGGTTTA
AATCCGTTTC TGGGCTATAG CCTGGTTGGG GTGGGAGCGG CAGCCTATTC ACCAGCTAAA
TATGGCATTC TGGGGGAAAT AACCTCTGGT GAGCAGTTGG TGAAAGCAAA CGGAATGATG
GAAGCCTCGA CGATCGCTGC GATCTTACTT GGCTCGGTTG CCGGGGGGAT ACTGGCAGAC
TGGCATTTAA TGGCCGCATT AGGGGTTTGC GCCTTGGTCT ATGCGATTGC GGTAATAGCC
AATTTATTTA TTCCACGTTT GGCCGCAGCA CGTTCAGGCG CTTCGTGGCG TCCACGGGCG
ATGACGGGCA GCTTCTTCAC CGCTTGCCGT CTTCTCTGGC AGGATAGCGA AACTCGCTTC
TCATTGGCGG GTACCAGCCT GTTTTGGGGG GCCGGTGTGA CGTTACGCTT CCTGTTAGTG
CTGTGGGTCC CTGTGGCGCT TGGCATTGCC GATAATGCGA CACCAACCTT GTTAAATGCC
ATGGTGGCGA TTGGGATTGT GGTGGGCGCG GGTGCCGCCG CCCGTTTTGT GACGCTAAAA
ACAGTGAAGC GTTGTTTACC GGCTGGCGTG CTGATTGGCG TGATGGTCAC CATCTTCTCC
CTGCAAAACA GTATGCCGAT GGCTTATTTG CTGTTAATTA TCATTGGGAT TTTGGGAGGG
TTCTTTGTGG TCCCACTCAA TGCGCTGCTA CAGGAGCGTG GTAAACACAG CGTTGGGGCT
GGGAATGCTA TTGCCGTACA GAATTTGGGC GAGAATACCG CGATGCTGTT TATGTTGGGG
CTTTACTCGC TGGTGGTCAA ATTAGGTGCC CCTGTTGTGG CGGTAGGTGT CGGTTTTGGT
GTGGTATTCG CGCTGGCTAT TGCTCTGTTA TGGGGCTGGC AGTGGCGGCA ACAGCGCCAG
AAAACGCGTC AGCCTGAATG A
 
Protein sequence
MSQDVLADKP LLSRSMVAVL CAQFFSAFGD NALLFATLAL IKQQLYPDWS QPILQMAFVA 
TYIVLAPFVG QIADGFAKGR VMMVANGLKL AGALVICFGL NPFLGYSLVG VGAAAYSPAK
YGILGEITSG EQLVKANGMM EASTIAAILL GSVAGGILAD WHLMAALGVC ALVYAIAVIA
NLFIPRLAAA RSGASWRPRA MTGSFFTACR LLWQDSETRF SLAGTSLFWG AGVTLRFLLV
LWVPVALGIA DNATPTLLNA MVAIGIVVGA GAAARFVTLK TVKRCLPAGV LIGVMVTIFS
LQNSMPMAYL LLIIIGILGG FFVVPLNALL QERGKHSVGA GNAIAVQNLG ENTAMLFMLG
LYSLVVKLGA PVVAVGVGFG VVFALAIALL WGWQWRQQRQ KTRQPE