Gene YpAngola_A3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3220 
Symbol 
ID5801695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3409510 
End bp3409905 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content48% 
IMG OID641341047 
Producthypothetical protein 
Protein accessionYP_001607573 
Protein GI162420886 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000258769 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.085571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTC GTTTAATGCT GATATTTTCC GCTCTGAGCG GTTTTTTCTA TGTTGCTTTC 
GGTGCCTTCG GGGCTCATGT ATTAAGCACC TCTCTGGGGC TGAATGAAAT GGCCTGGATT
CGTACCGGGC TGGAGTATCA GGGGTTCCAT ACGTTGGTTA TTCTGATATT AGCTGTTGCG
ATGCAACGGC AGGTCAGTCT TTGGTTTTAC TGGAGTGGGG CCTTGTTAGC GCTCGGAACG
CTACTCTTTA GCGGCAGTTT ATACTGTCTG GCTCTATCAC ACCTGAGACT GTGGATATAT
ATCACGCCAG TAGGCGGAGT CTGTTTTCTG GCGGGATGGA TTTTGATGTT GATTGGCGCA
CTGCGTCTAA GAAAAAGGGC AGAACGCCAT GAATAA
 
Protein sequence
MNSRLMLIFS ALSGFFYVAF GAFGAHVLST SLGLNEMAWI RTGLEYQGFH TLVILILAVA 
MQRQVSLWFY WSGALLALGT LLFSGSLYCL ALSHLRLWIY ITPVGGVCFL AGWILMLIGA
LRLRKRAERH E