Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3199 |
Symbol | ompA |
ID | 5801674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3390831 |
End bp | 3391892 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341028 |
Product | outer membrane protein A |
Protein accession | YP_001607555 |
Protein GI | 162418551 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000381188 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00427506 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGA CAGCTATCGC ATTAGCAGTG GCACTGGTAG GTTTCGCTAC AGTAGCGCAA GCCGCACCAA AAGATAACAC CTGGTACACC GGTGGTAAAT TGGGTTGGTC TCAGTATCAA GATACTGGTT CTATCATCAA TAACGATGGT CCAACTCATA AAGATCAGCT GGGTGCCGGT GCGTTCTTCG GTTACCAAGC AAATCAGTAC CTGGGCTTTG AGATGGGATA CGACTGGCTT GGTCGTATGC CTTACAAAGG CGACATCAAT AATGGCGCTT TCAAGGCTCA AGGCGTTCAG TTAGCAGCTA AACTGAGCTA CCCAGTAGCA CAAGACCTTG ACGTATATAC CCGTCTGGGT GGTTTAGTAT GGCGTGCAGA TGCTAAAGGC TCCTTCGATG GTGGTCTTGA CCGTGCTAGC GGCCATGATA CCGGTGTTTC TCCATTGGTA GCTCTGGGTG CTGAATACGC ATGGACCAAA AACTGGGCAA CCCGTATGGA ATACCAGTGG GTTAACAACA TCGGCGACCG TGAAACCGTT GGTGCTCGTC CAGACAACGG CCTCCTGAGT GTTGGTGTTT CTTACCGCTT TGGTCAGGAA GATGCAGCAG CGCCAATCGT TGCTCCAACA CCTGCTCCAG CGCCAATTGT TGACACTAAG CGTTTCACAT TAAAATCTGA TGTGCTGTTT GGTTTCAACA AAGCAAACCT GAAGCCAGAA GGCCAGCAAG CTCTGGACCA ACTGTACGCA CAACTGAGCT CTATCGATCC TAAAGATGGT TCTGTAGTTG TTCTGGGCTT TGCTGACCGT ATCGGTCAAC CAGCGCCTAA CTTAGCTCTG TCTCAGCGTC GTGCTGACAG CGTGCGTGAC TACCTGGTTT CTAAAGGTAT CCCTGCTGAC AAAATCACTG CTCGCGGTGA AGGTCAAGCA AACCCAGTTA CAGGCAACAC CTGTGACAAC GTGAAACCAC GTGCTGCTCT GATTGAGTGC CTGGCACCAG ATCGTCGCGT AGAGATCGAA GTGAAAGGCT ACAAAGAAGT TGTGACTCAG CCACAGGCTT AA
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Protein sequence | MKKTAIALAV ALVGFATVAQ AAPKDNTWYT GGKLGWSQYQ DTGSIINNDG PTHKDQLGAG AFFGYQANQY LGFEMGYDWL GRMPYKGDIN NGAFKAQGVQ LAAKLSYPVA QDLDVYTRLG GLVWRADAKG SFDGGLDRAS GHDTGVSPLV ALGAEYAWTK NWATRMEYQW VNNIGDRETV GARPDNGLLS VGVSYRFGQE DAAAPIVAPT PAPAPIVDTK RFTLKSDVLF GFNKANLKPE GQQALDQLYA QLSSIDPKDG SVVVLGFADR IGQPAPNLAL SQRRADSVRD YLVSKGIPAD KITARGEGQA NPVTGNTCDN VKPRAALIEC LAPDRRVEIE VKGYKEVVTQ PQA
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