Gene YpAngola_A3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3140 
Symbol 
ID5801614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3327383 
End bp3328060 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID641340974 
ProductD-alanyl-D-alanine carboxypeptidase family protein 
Protein accessionYP_001607502 
Protein GI162418240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA ATACATTAAC GCCGCAGATG CTTACTGGCC TTTCGACAGA TCATTTGGTG 
GTGTTAAGTG GCGCTCATCG CCTACAGCCA CAGGCGGCTG AGGCTTTTCA AGCAATGCAA
CAGGCCGCTA AAGTTGCGGG GTTTGATTTA CAACCCGCCA GTACTTTTCG CGATTTTGGC
CGCCAATTGG CTATTTGGAA TGGCAAATTT CGCGGTGAGC GGCCAGTATT AGATCAAGAC
AGCCAGCCGA TAGATATTTT CTCGTTAGAT ACCGCAGCCC GTTGTGAGGC GATATTGCGT
TGGTCCGCTC TGCCGGGAAC CAGCCGCCAT CATTGGGGTA GCGACCTGGA TATTTACGAT
CCATCGCGGC TACCAACGGG TGAAAAACTA CAGCTAGAGC CATGGGAATA CGATGCGGGT
GGCTATTTCT ATCCGCTCAC CCAATGGTTA AGTGCCCATA TGGCAGAATT TGGTTTTTAC
CGACCATTCG CTACAGATAA TGGGGGCGTC GCGGTGGAAC CCTGGCATTT GAGTTACCGC
CCTTTGGCAG AACAAGCGGA GCATTTGCTG ACCCCCAAGA TTCTACTGGC GGCTTGGCAA
TCACAAGATG TGGCGGGCAG TGAATGGCTG GCAAGTCATT TGCCGATGAT TTTTTCACGA
TTTATCTACC TTAAATAG
 
Protein sequence
MTDNTLTPQM LTGLSTDHLV VLSGAHRLQP QAAEAFQAMQ QAAKVAGFDL QPASTFRDFG 
RQLAIWNGKF RGERPVLDQD SQPIDIFSLD TAARCEAILR WSALPGTSRH HWGSDLDIYD
PSRLPTGEKL QLEPWEYDAG GYFYPLTQWL SAHMAEFGFY RPFATDNGGV AVEPWHLSYR
PLAEQAEHLL TPKILLAAWQ SQDVAGSEWL ASHLPMIFSR FIYLK