| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3103 |
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| Symbol | mdtA |
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| ID | 5801577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3283216 |
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| End bp | 3284499 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641340939 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_001607467 |
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| Protein GI | 162421557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGCGA TCATTATTGC GGTGCTTAGT TGGCGCTACT TTGGTACCGG CTCCGATAAC
AATACGTCAG GTGCTCAGCA GAGTGCCCGT GGTCAGGACA CTAGCCATGG TGGCCGCCGT
AATACACCGC TGGCACCGGT GCAAGCCGCA ACCGCAACCG AGCAGGAAGT GCCACGTTAT
CTCACTGGCT TAGGGACGGT CATTGCCGCC AATACTGTCA CGGTAACCAG CCGAGTTGAT
GGTGAATTGA TGGCCCTTCA TTTCACTGAA GGGCAGCAGG TTAAGGCTGG CGACTTACTG
GCAGAGATCG ACCCCCGCCC TTACGAAGTC CAACTGACGC AGGCTCAGGG GCAGTTGGCC
AAAGATCAGG CCACGCTGGA TAACGCCCGT CGTGATCTGG CCCGTTATCA GAAATTGTCC
AAAACTGGCC TGATTTCGCA ACAGGAACTG GATACGCAAT CTTCGCTGGT ACGCCAGAGC
GAGGGCAGTG TGAAAGCCGA TCAGGGCGCT ATCGACAGCG CCAAATTGCA ACTGACGTAT
AGCCGTATTA CCGCGCCTAT CTCCGGTAGA GTGGGCCTGA AACAAGTGGA TGTCGGCAAT
TACATTACCA GCGGCACGGC CACACCGATT GTGGTGATCA CCCAGACACA TCCCGTTGAT
GTGGTCTTTA CCCTGCCAGA AAGCGATATT CCCGCCATTA TACAAGCACA GAAAAATGCG
GAGAAGACTC ACGCCATCGT GCCCGTGGAA GCGTGGGATC GGACGAATAA ACAGATGCTG
GCACAGGGCT ACCTGCTCAG TATTGATAAC CAGATTGATA CTACGACGGG CACCATTAAA
CTGAAGGCCC GCTTTAATAA TGAAGATGAT GTGCTGTTCC CTAATCAGTT TGTTAACGCC
CGTATCAAGG TCGATTTGCT GCAAAATGCT GTCGTGGTGC CCACCGCAGC GGTACAAATG
GGCAGCGAAG GTAACTTTGT CTGGACGTTA GATGATGCAA ATAAAGTCAG CAAACATCTG
GTCACCACCG GGATTCAGAA TAGCCAACAA GTGGTTATCG ACGCAGGCCT GAACGCTGGG
CAACGCGTGG TCACGGATGG TATTGATCGC CTGACCGAGG GGGTACAGGT TGAAGTGGTG
ACACCACGCA GCGCCAATAC TGATGCTAAT CCAGCCAGTG CAGAGAAAGC GGCTGCAGAA
GCAGAAGGCA GCACCCCGCA TCAAGGCCGA GGGCGTCCGG CCAATGCGCC TGCACGTAGC
ACCACGGCTG CGGAGAAATC CTGA
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| Protein sequence | MVAIIIAVLS WRYFGTGSDN NTSGAQQSAR GQDTSHGGRR NTPLAPVQAA TATEQEVPRY
LTGLGTVIAA NTVTVTSRVD GELMALHFTE GQQVKAGDLL AEIDPRPYEV QLTQAQGQLA
KDQATLDNAR RDLARYQKLS KTGLISQQEL DTQSSLVRQS EGSVKADQGA IDSAKLQLTY
SRITAPISGR VGLKQVDVGN YITSGTATPI VVITQTHPVD VVFTLPESDI PAIIQAQKNA
EKTHAIVPVE AWDRTNKQML AQGYLLSIDN QIDTTTGTIK LKARFNNEDD VLFPNQFVNA
RIKVDLLQNA VVVPTAAVQM GSEGNFVWTL DDANKVSKHL VTTGIQNSQQ VVIDAGLNAG
QRVVTDGIDR LTEGVQVEVV TPRSANTDAN PASAEKAAAE AEGSTPHQGR GRPANAPARS
TTAAEKS
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