Gene YpAngola_A3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3025 
Symbol 
ID5801497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3196926 
End bp3197333 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID641340862 
Producthypothetical protein 
Protein accessionYP_001607392 
Protein GI162421923 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.318626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0401094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA TGATGTCACT TTGCTGGCAG TACCTGCGAG CTTTCACCAT TATTTACCTG 
TGCTTATGGG CAGGGAAAGC TCTGGCCTTA CTTCTGCCGA TTGTCATCCC CGGCAGTATC
ATCGGCATGT TGATTCTGTT CGTCTTACTC ACCTTGCAGA TTTTACCCTC ACCTTGGGTA
AAACCAAGCT GCCAGTTACT GATCCGCTAT ATGGCGCTAC TGTTTGTGCC GATAGGCGTC
GGAGTCATGC AATATTACGA ACAGCTCACT AAACAGTTCG GTCCGATCGT GGTTTCCTGC
TTTATCAGTA CCTTAATTGT TATGTTAGTG GTGGCCTATA GCTCACATTA TGTCCACCGT
GACCGCAAAG TCATTAGCCC TTCAACACCG ACTGAGGGGG AAAAATGA
 
Protein sequence
MRNMMSLCWQ YLRAFTIIYL CLWAGKALAL LLPIVIPGSI IGMLILFVLL TLQILPSPWV 
KPSCQLLIRY MALLFVPIGV GVMQYYEQLT KQFGPIVVSC FISTLIVMLV VAYSSHYVHR
DRKVISPSTP TEGEK