Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3024 |
Symbol | |
ID | 5801496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3196234 |
End bp | 3196929 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641340861 |
Product | hypothetical protein |
Protein accession | YP_001607391 |
Protein GI | 162421480 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.318383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0470923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA ATCTATGGTG GTCACTGCCG TTAACCTTAA TAGTGTTCTT TGGTGCACGC CAGCTATCCC GTTGGGCGAA AATCCCCCTA CTAAATCCAC TATTGATATC AATGGTCGTT ATTATTCCAT TGCTATTAGT CACGCATATG CCTTACGCCA ACTATTTTGC TGGTAGTAAA ATTCTGAATG ACTTGCTACA ACCCGCGGTC GTGGCGCTCG CTTTTCCACT GTATGAGCAG CTACATCAGA TCCGCGCCAG TTGGAAATCA ATTATTGCCA TTTGCTTTAT TGGCAGTATC ACTGCCATGG TCAGCGGTAC AGCGATAGCC CTGTGGATGG GGGCAACGCC AGAAATTGCG GCGTCCATAT TACCTAAATC CGTAACGACA CCGATTGCGA TGGCAGTGGC AGAGTCTCTT CATGGTTTAC CCGCTATTAG CGCAGTTTGC GTTATTTTTG CCGGTATTTT AGGGGCGGTG TTTGGCCACA GTTTGCTGAA TTTATTAAAA ATCACCACCA AAGCATCCCG TGGATTGGCG ATGGGGACGG CGTCTCATGC CTTAGGGACC GCCCGTTGCG CCGAACTAGA TTTTAAAGAG GGTGCGTTCA GCTCTTTAGC CCTAGTCATT TGCGGGATTA TCACCTCACT ACTGGCTCCG TTCCTGTTCC CGGTCCTATT ACATTTGTTT GGTTGA
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Protein sequence | MISNLWWSLP LTLIVFFGAR QLSRWAKIPL LNPLLISMVV IIPLLLVTHM PYANYFAGSK ILNDLLQPAV VALAFPLYEQ LHQIRASWKS IIAICFIGSI TAMVSGTAIA LWMGATPEIA ASILPKSVTT PIAMAVAESL HGLPAISAVC VIFAGILGAV FGHSLLNLLK ITTKASRGLA MGTASHALGT ARCAELDFKE GAFSSLALVI CGIITSLLAP FLFPVLLHLF G
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